Nostoc sp. UHCC 0702: JYQ62_35565
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Entry
JYQ62_35565 CDS
T10690
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nosu Nostoc sp. UHCC 0702
Pathway
nosu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JYQ62_35565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nosu03021
]
JYQ62_35565
03400 DNA repair and recombination proteins [BR:
nosu03400
]
JYQ62_35565
Enzymes [BR:
nosu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JYQ62_35565
Transcription machinery [BR:
nosu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JYQ62_35565
DNA repair and recombination proteins [BR:
nosu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JYQ62_35565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QSJ16921
LinkDB
All DBs
Position
complement(8082231..8083178)
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNTEESRSHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEILMRMKEVILKSYSSQPQIGRLLVNGPATVTVAHFDLPSEVEV
IDPTQYVATLAEGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSV
EEARGDGSITKDRLLLEVWTNGSLSPQEALSSAAGILVDLFNPLKDISLEPTDSGNEIPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPQERGSKHT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagagtctaatactgaggaaagtcgaagccattat
agtaaatttgttctggaacctctagagcgcggtcaaggaacaacagttggcaacgcgctg
cggcgggttttactgtccaatctagagggtacagcagtaacagcagtgcggattgcaggc
gtttcacacgagtttgccacagttccgggtgtacgtgaagacgtgctggaaatcttgatg
agaatgaaagaagtcatcctcaaaagctattcctcgcaaccccagattggtcgattgctc
gttaacggcccagcaacagttactgtggctcatttcgatttacccagtgaagtagaagtc
attgatccgacccagtacgtcgccaccctagccgagggcggaaaactggaaatggaattt
cgcattgaaagaggcaaagggtatcgcactgtagagcgaggacgtgaagaagccacatct
ttggacttcctgcaaatcgactcagtgtttatgccagtgcgtaaagtcaactatagcgtt
gaagaagcccgtggggatggctcgattaccaaagaccgattgctgttggaagtttggaca
aatggcagcctttctccccaagaagcactatcctcagctgctgggatcttggtagattta
ttcaatcccttgaaagatatctccctagaaccaacagattcagggaatgagatcccagac
gacccaaccgcccaaattcccatcgaggaattgcaactttctgtgcgtgcttataactgt
ctcaagcgagcgcaagttaactctgtagccgacttgttggattacacccaagaagactta
ttagaaattaaaaacttcggtcagaagtcagcagaagaggtagttgaagctttacagaga
cgtttaggcattaccctgccccaagagagaggatctaaacacacctaa
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