Nostoc sp. UHCC 0702: JYQ62_37215
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Entry
JYQ62_37215 CDS
T10690
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nosu Nostoc sp. UHCC 0702
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nosu03021
]
JYQ62_37215
Transcription machinery [BR:
nosu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYQ62_37215
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Joubert
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QSJ17216
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Position
8444564..8445520
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AA seq
318 aa
AA seq
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MKTAPTATDLVRTYLREIGRVPLLTHEEEIFYGKQVQRSTMLYDMREDLTTQLGHEPTIE
EWAKAAKLETAELNAVIAHGEIAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKAQRHLSQ
RLGRAPTASELAQELELTPKQVREYLEKARLPLSLDLRLGDNYDTELGEMLEDPGASPEE
FVMQSSLSKDLEQMMEELTPQQREVITLRFGLTDGQALTLARIGEILNISRERVRQIERE
ALTKLRKSKARMDEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgctccaacagccacagacctagtgcggacttacctgcgtgagattggccgt
gtgccactgttaactcacgaggaggaaattttttatggcaaacaggtgcaacgttcaacc
atgttgtacgacatgagggaagatcttactacccagttgggtcatgaaccgactatagaa
gagtgggcgaaagcggcgaagctagaaacagcagagttgaacgcagtgatcgctcatggt
gaaattgccaagcgtaagatggtagaagccaacttgcgactggtggtatctgttgccaaa
aagtatattaagcgcaacgtcgatttactcgacttaatccaagaaggcagcattggtatg
cagcgcggcgtagaaaagtttgaccccaccaagggttacagattttctacttatgcctat
tggtggattcgtcaagcaatcacaagagcgatcgctgaaaaagctcgtactatccgctta
ccaattcatattaccgaaaaattaaataagattaaaaaagcccagcgccacttatctcaa
agattgggacgcgctcccacagcttcagagctagctcaagaattagaattaactcccaag
caagtaagagagtatctagaaaaggcgcgtttgcctttatctttagatttacgcttgggg
gataactacgacactgaacttggagaaatgttggaagatccaggagcttctccagaagag
tttgtcatgcaatcttccctatctaaagacttagagcagatgatggaagaactcaccccc
caacaacgggaagtgatcaccttacgctttggattaaccgacggacaagccctaactctt
gccagaatcggcgaaatactcaatattagccgcgaacgagtacgccaaattgagcgggaa
gccttgactaaactccgcaagtctaaagcaaggatggatgaatatttggcgagttag
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