Nostoc sp. UHCC 0302: WKK05_00620
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Entry
WKK05_00620 CDS
T11286
Name
(GenBank) RpoD/SigA family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nosz Nostoc sp. UHCC 0302
Brite
KEGG Orthology (KO) [BR:
nosz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WKK05_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nosz03021
]
WKK05_00620
Transcription machinery [BR:
nosz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WKK05_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WZF17911
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All DBs
Position
140516..141667
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AA seq
383 aa
AA seq
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MNIAELGKMEILENAADNEEELLDNLDIVADEEPPIVEIIEIAENVESEERDGDAMAAAR
PSGYNKTEHDDAVGAFFKEMARYPLLKPDEEVELARRVRFLEEVREIQAALELELGQQAS
KLQVASQLEMTEKQLESRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAM
GLNRATEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLKKAQREL
KQKLCRNPSEAEMAEVLEINVQQLRQLQQLRRQALSLNHRVGKEEDTELMDLLEDEDNLS
PEAKMNENMMRQEIWEVLGDVLTPREKDVISLRYGLTTSEPCTLEEVGNMFNLSRERVRQ
IQSKAMRKLRRPHIAKRLKGWLI
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgctgaattgggaaaaatggaaatactggagaatgctgctgataatgaagaa
gaattacttgataatttagatatagtggcagatgaagaaccccccattgtagagattata
gagattgcagagaatgtcgaatcagaggaacgggatggcgatgcgatggctgccgcccgt
ccatcgggatataataaaaccgagcatgatgatgctgtaggtgctttttttaaagaaatg
gcgcgttatccgctcttaaagcctgatgaagaggtagagttagcgagacgagtcaggttt
ctagaagaagtaagggaaatccaagctgcattagagttagagttgggacaacaagctagc
aagctacaagtagcttcccagctagaaatgaccgaaaaacaattagaaagtcgcttgtat
caaggtcgggtagcgaaacgtaaaatgattcgctcaaacttgaggttagtagtatccatt
gccaagcgatatctcaatagaggagtgccttttctggatttaattcaggaaggagcaatg
ggtttaaaccgcgctacagaaaaatttgatccagataaaggatataagttttctacctac
gcctattggtggattcgacaagcgattaccagagcgatcgctaatgatgccagaactatt
cgcttgccaattcatattgttgaaaaactcaacaaacttaaaaaagcgcaacgcgaactc
aagcagaaactctgccgtaatccttctgaagctgaaatggcagaagttttagaaattaat
gtccaacagttacgccaactacaacaactacggcgtcaagcactttctctaaatcaccgt
gtcggtaaagaagaagacacggaattaatggatttgctagaagatgaggataacctgtct
cctgaagcaaaaatgaacgaaaatatgatgcgtcaggagatttgggaagtactaggtgac
gtgttgactccacgagagaaagatgtgatttctctgcgttatggattgacaaccagcgaa
ccctgtacattagaagaagttggcaatatgttcaatctttcccgtgagcgagtacgacaa
attcaaagcaaagctatgcggaaattgcggcgtccacacatagccaaacgcttaaaaggt
tggttaatttaa
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