Nostoc sp. UHCC 0302: WKK05_32075
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Entry
WKK05_32075 CDS
T11286
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nosz Nostoc sp. UHCC 0302
Pathway
nosz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nosz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WKK05_32075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nosz03019
]
WKK05_32075
Messenger RNA biogenesis [BR:
nosz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WKK05_32075
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
WZF17109
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Position
7517813..7519582
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AA seq
589 aa
AA seq
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MAKNEATSALKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTEAMHGVNIVLPDTTY
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRTVSPRDIVRLGKNFLVEYIRNTHSIADSFTVAIHTPLGIVIHTGDFKFDHTPVDGEKF
DLQRLAEHGEQGVLCLLSDSTNSEVPGFTPSERSVYPNLDRVFSQATGRLFVTTFASSVH
RINMILQLAKKHNRVVSVVGRSMLNLIAHARNLGYIKCEDNLLQPLHTVRSLPDERVLIL
TTGSQGETMAAMTRIANKDHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVV
YGRDKGIHVSGHGCQEDQKLMIALTRPKFFLPVHGEHRMLVKHSETAQSMGIPAENMIII
QNGDVVELTENAIRVAGKVPSGIELVDTTSSGMVSDKVLQERQRMAEEGIVTIAAAVDWN
GKLMAKPEIHLRGVVTSMERSVLQKWVQQRMEEILTVRWSEFAPTDGEAADIDWGGLQAT
LERELQRSIRRELQCQGSVTLLMQTPDEPPVKVADGRRRRTRTAAQVAS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacgaagctacctccgccctaaaaattattccgttgggcggtttgcatgaa
attgggaaaaatacctgtgtatttgagtacgatgacgaaattatcctattagatgcagga
ttggcttttcctacagaagcaatgcatggagtcaatattgtcctaccagatacgacttat
ctgcgggaaaatcgtcataaaattaaaggaatgattgttacccacggtcatgaagaccat
attggtgggattgcttttcatctgaaacaatttgacatacccgtaatctatggtcccaga
ctagcaatggcaatgctagagggtaaattggaagaagcaggagtgcgcgatcgcacagaa
ttaagaacagtgtcaccgcgtgatatagtgcggcttggcaaaaacttcctagtagaatat
attcgcaatacccactccatcgctgatagttttactgttgctattcatactccccttggt
atagtaattcatacaggagattttaaatttgaccacactcccgtggatggggaaaaattt
gacttacaacggttagcagaacacggcgaacaaggcgtactttgcttattaagcgattca
actaactccgaagtcccaggatttaccccttcagaacgctcagtttatcccaatcttgat
cgggtatttagtcaagctacagggcgactgttcgttacaaccttcgcttcctccgtgcat
cgcattaacatgattttgcaactggcaaaaaaacacaatcgtgtagtgtcagttgtagga
cgttccatgctgaatttgattgctcatgctcggaatttaggttacatcaaatgtgaagat
aatttgctgcaaccattacacacagtccgcagcttgcctgatgaaagagtgttgattctg
actacaggatctcaaggtgaaacaatggcggcaatgacccggattgccaataaagatcat
ccgcacatcaaaattcgtgaaggagacacagtagtattctctgcgaatccaattccagga
aatacgatcgctgtagtcaataccatcgacaaattgatgatccagggggcgaaagtggtc
tatggccgcgataaaggtattcacgtctctggtcacggctgtcaagaagaccaaaaacta
atgattgccttaactcggcctaagtttttcttgccagttcacggtgaacatcgaatgctg
gtgaaacactcggaaacagcccaaagtatgggcattcccgcagaaaacatgatcattatc
cagaatggtgatgttgtagaactgaccgaaaatgccattcgtgttgcgggtaaagtccca
tctggtatagaactggtggatactactagttctggcatggtgagtgacaaggtgttgcaa
gaacggcaacgtatggcagaagaaggtattgttaccattgctgccgctgttgattggaat
ggcaaactaatggccaagccagaaattcatctacgtggtgtagtcaccagtatggagcga
tcagtgctacaaaagtgggtacaacaacgaatggaagaaatcctcaccgttcgttggtca
gaatttgctcctaccgacggtgaagcagcagatatcgattggggcggactacaagcaact
ttagagcgagaattgcaacgttccattcgccgagaactacagtgtcaagggtctgtgact
ttgttgatgcaaactcctgatgagccacctgtgaaagttgctgatggcagaagacgtcgc
actcgcacagctgctcaagttgcatcctag
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