KEGG   Nostoc sp. UHCC 0302: WKK05_32075
Entry
WKK05_32075       CDS       T11286                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nosz  Nostoc sp. UHCC 0302
Pathway
nosz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nosz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WKK05_32075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nosz03019]
    WKK05_32075
Messenger RNA biogenesis [BR:nosz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WKK05_32075
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RMMBL RNase_J_C Anti-Pycsar_Apyc1 Lactamase_B_2
Other DBs
NCBI-ProteinID: WZF17109
LinkDB
Position
7517813..7519582
AA seq 589 aa
MAKNEATSALKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTEAMHGVNIVLPDTTY
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRTVSPRDIVRLGKNFLVEYIRNTHSIADSFTVAIHTPLGIVIHTGDFKFDHTPVDGEKF
DLQRLAEHGEQGVLCLLSDSTNSEVPGFTPSERSVYPNLDRVFSQATGRLFVTTFASSVH
RINMILQLAKKHNRVVSVVGRSMLNLIAHARNLGYIKCEDNLLQPLHTVRSLPDERVLIL
TTGSQGETMAAMTRIANKDHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVV
YGRDKGIHVSGHGCQEDQKLMIALTRPKFFLPVHGEHRMLVKHSETAQSMGIPAENMIII
QNGDVVELTENAIRVAGKVPSGIELVDTTSSGMVSDKVLQERQRMAEEGIVTIAAAVDWN
GKLMAKPEIHLRGVVTSMERSVLQKWVQQRMEEILTVRWSEFAPTDGEAADIDWGGLQAT
LERELQRSIRRELQCQGSVTLLMQTPDEPPVKVADGRRRRTRTAAQVAS
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggctaaaaacgaagctacctccgccctaaaaattattccgttgggcggtttgcatgaa
attgggaaaaatacctgtgtatttgagtacgatgacgaaattatcctattagatgcagga
ttggcttttcctacagaagcaatgcatggagtcaatattgtcctaccagatacgacttat
ctgcgggaaaatcgtcataaaattaaaggaatgattgttacccacggtcatgaagaccat
attggtgggattgcttttcatctgaaacaatttgacatacccgtaatctatggtcccaga
ctagcaatggcaatgctagagggtaaattggaagaagcaggagtgcgcgatcgcacagaa
ttaagaacagtgtcaccgcgtgatatagtgcggcttggcaaaaacttcctagtagaatat
attcgcaatacccactccatcgctgatagttttactgttgctattcatactccccttggt
atagtaattcatacaggagattttaaatttgaccacactcccgtggatggggaaaaattt
gacttacaacggttagcagaacacggcgaacaaggcgtactttgcttattaagcgattca
actaactccgaagtcccaggatttaccccttcagaacgctcagtttatcccaatcttgat
cgggtatttagtcaagctacagggcgactgttcgttacaaccttcgcttcctccgtgcat
cgcattaacatgattttgcaactggcaaaaaaacacaatcgtgtagtgtcagttgtagga
cgttccatgctgaatttgattgctcatgctcggaatttaggttacatcaaatgtgaagat
aatttgctgcaaccattacacacagtccgcagcttgcctgatgaaagagtgttgattctg
actacaggatctcaaggtgaaacaatggcggcaatgacccggattgccaataaagatcat
ccgcacatcaaaattcgtgaaggagacacagtagtattctctgcgaatccaattccagga
aatacgatcgctgtagtcaataccatcgacaaattgatgatccagggggcgaaagtggtc
tatggccgcgataaaggtattcacgtctctggtcacggctgtcaagaagaccaaaaacta
atgattgccttaactcggcctaagtttttcttgccagttcacggtgaacatcgaatgctg
gtgaaacactcggaaacagcccaaagtatgggcattcccgcagaaaacatgatcattatc
cagaatggtgatgttgtagaactgaccgaaaatgccattcgtgttgcgggtaaagtccca
tctggtatagaactggtggatactactagttctggcatggtgagtgacaaggtgttgcaa
gaacggcaacgtatggcagaagaaggtattgttaccattgctgccgctgttgattggaat
ggcaaactaatggccaagccagaaattcatctacgtggtgtagtcaccagtatggagcga
tcagtgctacaaaagtgggtacaacaacgaatggaagaaatcctcaccgttcgttggtca
gaatttgctcctaccgacggtgaagcagcagatatcgattggggcggactacaagcaact
ttagagcgagaattgcaacgttccattcgccgagaactacagtgtcaagggtctgtgact
ttgttgatgcaaactcctgatgagccacctgtgaaagttgctgatggcagaagacgtcgc
actcgcacagctgctcaagttgcatcctag

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