Nostoc sp. UHCC 0302: WKK05_38005
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Entry
WKK05_38005 CDS
T11286
Name
(GenBank) ribosome assembly protein 4
Organism
nosz Nostoc sp. UHCC 0302
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_EIPR1
RMC1_N
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
nSTAND1
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
DUF5711
TPR_12
Mala_s_1-like
WD_LRWD1
Beta-prop_IP5PC_F
TPR_2
Beta-prop_DCAF12
VID27
TPR_1
AAA_16
AAA_22
RsgA_GTPase
TPR_9
TPR_10
TPR_11
ATPase_2
nSTAND3
TPR_8
NACHT
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WZF21872
LinkDB
All DBs
Position
unnamed5:37429..42945
Genome browser
AA seq
1838 aa
AA seq
DB search
MDIQRQSDEPIDNERSLQQLAWTLQASVGQFKLIWARCNYSDLRTRLIARLSEICKIKIQ
VLQLKESEKTLYTAIRSELQSDTQALMIVGWESLQDLPQMLTSANQVREEFRKNLSIPVV
VWISEEIHHTIMEIAPDLESWGTSRSFAIAQPDLAQFIKQLADEYFDSKPSINDYSILEL
ELEAAQRELRSSDNETEANLAPVLGFVKQTNKKIDEALKYYQKARAIWQQLNNTQRQGKI
LGEIAYCYYLKASKIKDTAHGDWQATRQYTQEYIAFINEANRQDLAASSIAKFGNILRDL
KEWEQLKKLAQQALEVHQANNQPIELALDYGFLAQVALAQSHWSEAKELAQKALDVLPGN
SSAEVIPDLLQESVELHDPSFYKYILAQAEYELGLTQQAIANLEAARDVSSPIKDLQLHL
DILSYLQRVYCEQKEYLKAYNIKQQQRSVEQQFGLRAFIGAGRLQSTKLAQVALNKTDIQ
ESIAPEIAASGRLLDIERLVERLGRHDHKLIVIHGQSGVGKSSLVNAGLVPALKNKSVGI
QDYLPVAMRVYTNWVEELGRSLQQAFHERRGAGNEQVLELEVDALIAQLRENEQHNLRTV
LIFDQFEEFFFVYTQLHHRQQFFEFLGECLNILSVKIILSLRVDYLHYLLECNDLSNMAI
IGKDILSSNVLYKLGNFSSADTKSIIQRLIKTTSFNLECALIEQIVQDLAVELSEVRPIE
LQIVGSQLQTENITTLAEYQQRGTKEELVKRYLAEVVNDCGVENQQIAEFLLYLLTDEKG
TRPLKTRVEIELELQALAAEIATPSNNLDLVLEILVKSGLVILLLENRANRYQLVHDYIA
VLVRQQQEPKLNQLMAQLEEEKQQRKLSEEQRKLGEAKLNSFLKRALFGSVAAGVVLAVL
AVTAFFQTQQAEKQRYLALEQKKLAQEQRNLAQNSEIKVLANSSEALLLSEQYFDALTQA
LNAGGNLKKTEVSKSNNIRMQTTVALREAIYLQLDENQFRERNRLEGHSGAVTSVSFSPD
NQTIATASDDKTVKLWDRSGKQLKTLNGHSGAVYSVSFSPDNQTIATASDDKTVKLWDRS
GKQLKTLNGHSGAVYSVSFSPDNQTIATANQDGTVKLWDRNGKQLKTLKRHSGYVSSVSF
SPDNQTIATANQDGTVKLWDRNGKQLKTLNGHSGAVYSVSFSPDNQTIATASDGKTVKLW
DRNGKQLKTLNGHSGMVRSVNFSPDNQTIATASDDGTVKLWDRNGKQLKTLNGHSGMVRS
VNFSPDNQTIATANQDGTVKLWDRNGKQLKTLNGHSGAVLSVSFSPDNQTIATASDDSTV
KLWDRNGKQLKTLKGHSGAVLNVSFSPDNQTIATANQDGTVKLWDRNGKQLKTLNGHSGM
VRSVNFSPDNQTIVTASYDNTVKLWDRSGKQLKTLKGHSGYVSSVSFSPDNQTIATASYD
NTVKLWDRSGKQLKTLKGHSLAVFSVSFSPDNQTIATASNDGTVKLWDHSGKELKTLKGH
SGAVTSVSFSPDNQTIATASSDNTVKLWDRSGKELKTLKGHSGTVFSVSFSPDNQTIATA
SYDGTVVLWDLNLDNLLKDGCSWLNNYLAIHPDTLEELTVCQISEIKKQAASALVAQGEN
LARKGNIQAAVTKFHKAQEWDVDLKLNPTDPGKKAQQLADSSSLVAQGEELAQAGDLESA
VVDFQKALKLDSKLEIEPRTKAASILLEEGTSFVFNEKFKEALEAYNKAQAFDIKVEVSA
ENWNSLCRQGSLKRQANIVLPACNKAVALSPSDRNIQAIRGLARALTGDFKGAIADFESY
IAQTDDKDSKAQIQRYVKELRAGKNPFTDAELKKLRGE
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggatatacagcgccaatcagatgaacccatagacaacgagcgttcactacagcagtta
gcttggacacttcaagcttcggtgggacaatttaagctgatttgggcgcggtgtaattac
agcgatttaaggactcgtttgatagcaaggttaagcgaaatctgtaaaattaaaattcag
gtactgcaacttaaagaatcagaaaagacgctctacactgcaatccgttcagaattacag
tcagatacccaagctctgatgattgtgggctgggagtcattgcaagatttaccgcagatg
ttgacaagtgctaatcaagtacgcgaagaatttcgtaaaaacttgtctattcccgtagtc
gtgtggattagtgaagaaatccaccacaccattatggagattgcccctgacttggaaagc
tggggaactagcagaagttttgcgatcgcgcagcctgatttagcccaattcattaaacaa
ctggctgatgaatattttgatagtaaaccaagtataaatgattactctatactagagtta
gaactagaggcagcacagagagaattgcggtctagtgacaacgaaacagaagctaattta
gcccctgtgctaggttttgtcaaacaaactaataagaaaatagacgaagctttaaagtat
taccaaaaagctagagctatatggcaacaactgaataatacccaaaggcaaggaaagatt
ctcggtgagatagcttactgttattatctcaaagcttctaaaattaaagatactgctcat
ggagactggcaagctactcggcaatatacgcaagaatacattgcctttattaacgaagct
aataggcaagatttagctgctagttctattgccaagtttggtaatattttgcgtgatttg
aaagagtgggagcaactcaaaaaattagctcagcaggctttagaagtacatcaagctaac
aatcagccaatagaattagctctagattacgggtttttagcccaggttgcactggctcaa
tcgcactggagtgaagccaaagaattagcacaaaaagcattagatgtcttaccaggaaat
tctagtgcagaggtaatacctgacctcttgcaagaatctgtagaattacatgatccgagt
ttttataaatatattttggcgcaggctgaatatgaattaggtttaactcaacaggcaatt
gctaacttagaagctgcaagagatgttagcagccctattaaagatttacagcttcacctg
gatattctcagttacttgcagcgcgtctactgtgagcaaaaagaatatctcaaagcatac
aacatcaaacaacagcagaggtctgttgaacaacagtttggtttgagggcgtttatcggt
gcaggtcgattacagtcaactaaacttgctcaagtagcactgaacaaaactgatattcaa
gaaagtattgccccagaaattgctgcatcaggtcggttattagatattgaacgattagtg
gaacgtctgggacggcatgatcacaaactaatagtcattcatgggcaatcaggtgtaggt
aaaagttcgctagttaatgcgggattagttccggctttaaagaataaaagcgtaggtatt
caagactatctacctgtggcaatgcgagtttacactaattgggtggaagaactcgggcga
tcattgcaacaagcttttcatgaaaggaggggagctggaaatgagcaagttttagaactt
gaggttgacgctttaattgcccaactgcgcgaaaatgaacagcacaatctcagaacagtg
ctgatttttgaccagtttgaagagtttttctttgtttacacccagctgcatcacagacag
caattttttgagttcctgggtgaatgtcttaatattctttcagtgaagataattttgtcg
ttgcgggtggattacttgcactacttgttggagtgtaatgatctctctaatatggcaatt
attggtaaggatattcttagcagtaatgttctttacaagttaggtaatttttcatctgct
gataccaagtcaatcattcagcgtttgatcaagactaccagttttaacttagagtgtgct
ttaatcgagcaaatagtgcaggatttggctgtagagctaagcgaagtacgtcccattgaa
ttacagatcgtgggatcgcaactacaaacagagaacataacgactctggcagaatatcag
cagcgtggtacgaaagaagaactagttaaacgctatttggctgaggtggttaatgattgt
ggtgtagagaaccaacagatagccgagtttttgttgtacttgctgacagatgaaaaaggg
actcgtccacttaaaacgcgtgttgaaatagaactagaactgcaagccttagccgcagag
atagccactcctagcaataatttagatttggtgttagaaattttagtcaaatctggtttg
gtgattttgttactagagaatcgggctaatcgttatcagctagtacatgattacatcgct
gtgcttgttcgccagcagcaagagccgaagttaaatcagttgatggctcaactggaagag
gaaaagcagcaaagaaaactcagtgaagaacaaagaaagctgggtgaggctaaacttaat
agttttttgaaacgcgctctatttggttcagttgcagctggagtagtcttagctgtgctg
gcagttacagcgttctttcaaacacagcaagccgaaaaacaaagatatcttgccttagaa
cagaaaaaacttgctcaagaacaaagaaatcttgcccaaaacagcgaaattaaagtacta
gctaattctagtgaggcacttttactttcagagcagtattttgatgctttaacacaagct
ttaaatgcagggggaaatcttaaaaagacagaagtttcaaaatcaaataatatcaggatg
cagacaactgtagcgttacgggaagcgatctacttacaattagatgaaaatcaatttaga
gaacgtaaccgtttagaggggcatagcggtgcagtcacaagtgtaagtttcagtccggat
aaccagaccatcgctactgcaagtgatgacaagacagtaaaactgtgggataggagtggc
aagcaacttaaaacactcaacgggcatagcggtgcagtctatagtgtaagtttcagtcca
gataaccagaccatcgccactgcaagtgatgacaagacagtaaaactgtgggataggagt
ggcaagcaacttaaaacactcaacgggcatagcggtgcagtctatagtgtaagtttcagt
ccggataaccagactatcgccactgcaaatcaagacggtacagtaaaactgtgggatagg
aatggcaagcaacttaaaacactcaagaggcatagcggttatgttagtagtgtaagtttc
agtccggataaccagaccatcgccactgcaaatcaagacggtacagtaaaactgtgggat
aggaatggcaagcaacttaaaacactcaacgggcatagcggtgcagtctatagtgtaagt
ttcagtccggataaccagaccatcgccactgcaagtgatggcaagacagtaaaactgtgg
gataggaatggcaagcaacttaaaacactcaacgggcatagcggtatggtcagaagtgta
aatttcagtccggataaccagaccatcgccactgcaagtgatgacggtacagtaaaactg
tgggataggaatggcaagcaacttaaaacactcaacgggcatagcggtatggtcagaagt
gtaaatttcagtccggataaccagaccatcgccactgcaaatcaagacggtacagtaaaa
ctgtgggataggaatggcaagcaacttaaaacactcaacgggcatagcggtgcagtctta
agtgtaagtttcagtccggataaccagaccatcgccactgcaagtgatgacagtacagta
aaactgtgggataggaatggcaagcaacttaaaacgctcaaggggcatagcggtgcagtc
ttaaatgtaagtttcagtccggataaccagaccatcgccactgcaaatcaagacggtaca
gtaaaactgtgggataggaatggcaagcaacttaaaacactcaacgggcatagcggtatg
gtcagaagtgtaaatttcagtccggataaccagaccatcgtcactgcaagttatgacaac
acagtaaaactgtgggataggagtggcaagcaacttaaaacactcaaagggcatagcggt
tatgttagtagtgtaagtttcagtccggataaccagactatcgccactgcaagttatgac
aacacagtaaaactgtgggataggagtggcaagcaacttaaaacgctcaaggggcatagc
cttgcagtctttagtgtaagtttcagtccggataaccaaaccatcgccactgcaagtaat
gacggtacagtaaaactgtgggatcacagtggtaaggaacttaaaacactcaaggggcat
agcggtgcagtcacaagtgtaagtttcagtccggataaccagaccatcgccactgctagt
tctgacaacacagtaaaactgtgggataggagtggcaaggaacttaaaacactcaagggg
catagcggtacagtctttagtgtaagtttcagtccggataaccagaccatcgccactgca
agttatgatggtacagtagttttatgggatttaaatttagataatttattaaaagatggt
tgtagttggctgaataattatctcgctattcatcctgataccttggaagaattaacagtc
tgccagatttcagaaatcaaaaaacaagcggctagtgcgttagttgctcaaggtgaaaac
ttagcacgcaagggtaacatccaagctgctgttactaagtttcacaaagcacaggagtgg
gatgttgatttaaaacttaacccaactgatccaggtaaaaaagcgcagcaattagctgat
tcttcttctctagttgctcagggtgaagagttagcacaagcaggtgatcttgagagtgca
gttgttgattttcaaaaagctttgaaactagattctaaattagagattgagccaaggacg
aaagctgcctcaattttgcttgaagaaggtacaagttttgttttcaatgaaaagtttaaa
gaagccttagaagcttataataaagcccaagcatttgatattaaggtagaagtttctgct
gaaaattggaactcactttgtaggcaaggtagcttaaaaagacaagccaacattgtgtta
cctgcttgcaacaaagccgtagccctttcgccaagcgatcgcaatatccaagccatacgt
gggttagccagagcattaacaggggacttcaaaggagcaattgcagactttgagtcatat
attgcccagaccgatgataaagatagtaaagcacaaatacaacgctatgtaaaagagttg
cgcgctggcaagaatccgtttacagatgcagaacttaaaaaactgcgtggcgagtag
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integrated database retrieval system