Novosphingobium sp. THN1: C7W88_00715
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Entry
C7W88_00715 CDS
T05635
Name
(GenBank) secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
not
Novosphingobium sp. THN1
Pathway
not02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
not00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C7W88_00715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
not02044
]
C7W88_00715
02035 Bacterial motility proteins [BR:
not02035
]
C7W88_00715
Secretion system [BR:
not02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
C7W88_00715
Bacterial motility proteins [BR:
not02035
]
Pilus system
Pilus assembly proteins
C7W88_00715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
AXU20406
LinkDB
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Position
147197..148828
Genome browser
AA seq
543 aa
AA seq
DB search
MRQIPTSKGSTMNRRFSSKLLTAALIAAPLAMMPASGMLHAQSLTSPARTVTISIGRGEL
VTVPGRMADVFVADDKVADVQVKSTNQFYVFGKSGGETTVYASNAKGDVVWSANIRVGNN
IDSIDQMLHLAMPEARVNVATMNNTVLLTGTVGAPEDAAEAERLVRAFVGDKTNVISRLK
MATPLQVSLHVKFAEVSRTLVRDLGVNLTSIDGTGGFKFGIGQGRSVGSFFTTDRNLPFG
VGTSSTTGFTFDPTKVTEANPLGLVEKPGSSVTAAATGTTIAGMGKFLGLDLLGALDAAE
TIGLVTTLSEPNLTALSGETADFLAGGEYPIPVSQGLGTTSIEYKRYGVSLAYTPTVLAN
GRISIRVRPEVSELSSTGALKLDSVEIPALTVRRAETTIELGSGQSFMIAGLLQNGAQNA
LTKMPGVGDVPILGSLFRSTRYRKGETELVIVVTPYLVNPVNASDIKLPTDGFQSPNDIQ
RLLGNMEHDGITGGDRPKPTEKEGTVQSGPKVGSLDKPAKASQPADRRSDKKVASVEPGF
SIQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagatcccgacctcgaagggcagcaccatgaaccgccgtttttcctccaagctt
ctcacggccgcgctgatcgctgccccgctggcaatgatgcccgcttccggcatgctccac
gcacaaagcctgacgagccctgcccgcactgtcacgatttcgatcggacgcggcgaactg
gtcaccgtgccgggccggatggctgacgtattcgtcgctgacgacaaggtggcagacgtc
caggtcaagtcgaccaaccagttctacgtcttcggcaagtcgggcggtgagaccacggtc
tacgccagcaacgccaagggcgatgtcgtgtggtcggcaaacatccgcgtcggcaacaac
atcgactcgatcgaccagatgctgcacctcgccatgcccgaggcccgcgtcaacgtcgcg
acgatgaacaacacggtcctgctgaccggcaccgtcggcgcgcccgaagacgcagccgaa
gccgaacgcctggtccgcgcctttgtcggcgacaagaccaacgtgatcagccgcctgaag
atggcaacgccgctgcaggtcagcctgcacgtgaagttcgccgaagtcagccgcaccctg
gtacgcgacctgggcgtgaacctcaccagcatcgacggcactggcggtttcaagttcggc
attggtcaaggcaggtcggtcggatcgttcttcaccactgaccggaacctgccgtttggc
gtcgggacgtcatcgaccacaggcttcaccttcgacccgaccaaggtgaccgaggcgaat
ccactcggcttggtggaaaagccaggcagttcggtgacggccgccgctacgggcaccacc
attgccggaatgggcaagtttctcggcctcgatctgctgggtgcgctcgatgccgccgag
acgatcggcctcgtcaccactctgtccgagccgaacctgaccgcgctttcgggcgagact
gccgatttccttgccggcggcgaatatccgatccccgtctcgcaagggcttggcaccacc
tcgatcgaatacaagcgctacggcgtcagccttgcctatacgccaacggtcctggccaat
ggccgcatctcgatccgcgtgcgcccggaagtctccgagctttcgagcacgggcgcgctg
aagctcgacagcgtcgaaatccccgccctgaccgtgcgccgtgccgaaacgacgatcgaa
ctcggttcgggccaatccttcatgatcgccggcctgctgcagaacggcgcgcagaatgcc
ctgaccaagatgccgggcgtgggtgacgtgccgatcctcggctcgctgttccgctcgacc
cgctatcgcaagggcgaaaccgagctggttatcgtggttacgccgtatctggtgaacccg
gtcaacgccagcgacatcaagcttccgaccgacggcttccagagcccgaacgatatccag
cgcctgcttggcaacatggagcacgacggcatcaccggtggcgatcgccccaagccgacc
gagaaggaaggcacggttcaatccggccccaaggtcggcagcctcgacaagcccgcgaag
gcatcgcagcccgccgatcgccgcagcgacaagaaggtcgccagcgtcgaacccggcttc
agcatccagtga
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