Novosphingobium sp. THN1: C7W88_02465
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Entry
C7W88_02465 CDS
T05635
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
not
Novosphingobium sp. THN1
Pathway
not02020
Two-component system
not02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
not00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C7W88_02465
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C7W88_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
not03021
]
C7W88_02465
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
not02035
]
C7W88_02465
Transcription machinery [BR:
not03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7W88_02465
Bacterial motility proteins [BR:
not02035
]
Flagellar system
Flagellar assembly proteins
Stator
C7W88_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Rv2175c_wHTH
HTH_23
KORA
UPF0122
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AXU18158
LinkDB
All DBs
Position
complement(485866..486600)
Genome browser
AA seq
244 aa
AA seq
DB search
MKHDHRGFAAARAYAQNEAADRIRRFLPLVKRLAWHVHGSGRAGIEIEDLIQAGLVALTE
CAQRHDGPTEDGFAAYAKLRVRGAMVDLVRRSTPLSRSATERRRLLRERTTALTNDLGRP
PNDAELAAAMGLTERELADQKAADEPLRFETIDDAYSDSNAAFADDRPDAFAMLADDEMR
GAVASAIADLPERLQMIIQLYFVEELNLAEIAEVLGVSIPRVHQLKAQALDKLRASLGEG
YDIL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgaccaccgcggttttgccgccgcccgcgcctatgcgcagaacgaggccgcc
gaccgtatccgccgcttcctgccactggtgaagcgccttgcctggcacgtccacggctcg
ggccgcgccgggatcgagatcgaggacctcatccaggccggcctcgtggcgttgacagaa
tgcgcccagcggcacgacggcccgaccgaagacggcttcgccgcctacgccaagttgcgc
gtgcgtggcgccatggtcgacctcgttcgccgctccaccccgctctcccgttcagcaacc
gaacgccgccgcctcctgcgcgagagaaccaccgcgctgaccaacgatctcggccgcccg
cccaacgacgccgaactagccgccgccatgggcctgaccgaacgcgagctggccgaccag
aaggccgcagatgagcctttgcgtttcgaaacgatcgacgatgcctattccgacagcaat
gccgcctttgccgacgatcgcccggatgccttcgccatgctcgcggacgacgaaatgcgc
ggagcagtagcctcggcgatcgccgacctgcccgaacggctgcaaatgatcatccagctc
tactttgtcgaggagctgaaccttgccgaaatcgccgaagtcctcggcgtcagcatcccg
cgtgtgcaccagctgaaggcgcaggcgctcgacaagctgcgtgcctcgcttggcgagggc
tacgatattctctga
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