Novosphingobium sp. THN1: C7W88_02955
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Entry
C7W88_02955 CDS
T05635
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_02955
Transporters [BR:
not02000
]
Other transporters
Pores ion channels [TC:
1
]
C7W88_02955
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Ortholog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXU18227
LinkDB
All DBs
Position
complement(583927..586278)
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AA seq
783 aa
AA seq
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MAQVHRTTSHVRLLAAGSLAALSLGLAMPAMAQQAQAQDQAQADENTPESAREIVVTAQF
REQRLQDTPLSITAVDATLLASRNQTDIAQIAQQAPNVQLNAMGGAYGSSLGAAIRGVGQ
FDFNPAYEPGVGMYVDDVYYATLTGSIFDLLDLERVEVLRGPQGTLTGRNAIGGAIKLFS
KKPTDENSGMVEAVYGSRNRVDIRGSANFILAQDLYARVSGVYKRQNGYVDQIDYGCAKP
GNPQGISARPGSGQDCVIDKLGEKGYAGLRGSLRYNPGDNFDLVIIGDYTHEERTNAAEV
ISLINPARITNAYACGRFCTYANFYAPPGGFVSQGYEMPNRLKFDGYGFSANMTIGLSDS
LNVQSITAYRNYRQKWGTDDDFTPDLAIAGQGYNDLKFWFFSQELRVNGKIGDNIDFTVG
GFYSDQRSVYFTRQDIRYIAPGLNFQFLGNDPVNADSKAVFGTVIARPIEGLTVTGGLRY
TEEAKDYTFVRKNYDGTRSIFLGALDGVTATFKGDRVDWRVSADYRFSPEVLAYVTVGTG
FKGGGVTARPFDAAQALNGSFDPETVTAYEAGLKTDLFDRRLRLNIAGFINDYNDIQLPL
ISCASLGSNAPCGARQNAGNGQIKGFELEMQASPIEGLDIDASLSHLTGKYKNIDPRVGN
AILLTDPIVTPNWKYSFGIQYRADLGSAGSLTPRFDFAHTGKTSAGRIAAGLPIEYFNAY
DIGNARLTWRNEAEDLSISMEVQNVFNEYYTPFRFAAVYAFTGTAYSQVGRPREWAVTVQ
KRF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtccatcgtaccacgtcacacgtgcgcctgcttgcggcaggtagcctggct
gcactttcgctcgggctggccatgcccgcgatggcgcagcaagcccaggcgcaagaccag
gcccaagcggatgagaacactccggaatcggcgcgcgagatcgtcgtgaccgcgcagttc
cgcgagcagcgcctgcaggatacgccgctgtcgatcaccgctgttgacgcaacattgctc
gcctcgcgcaaccagaccgacatcgcccagatcgcgcagcaggcgcccaacgttcagctc
aacgccatgggcggcgcctatggttcctcgctgggagcagccattcgcggtgtcggtcag
ttcgacttcaaccccgcctacgaaccgggcgtcggcatgtatgtggacgatgtctactat
gcgacgctgaccggctcgatcttcgacctgcttgaccttgagcgcgtcgaagtcctgcgc
ggtccgcagggcacgctgaccggccgcaacgccatcggcggcgcgatcaagctgttctcg
aagaagcctaccgacgagaattcgggcatggtcgaggctgtctacggcagccgcaaccgc
gtcgatatccgtggcagcgccaacttcatcctcgcgcaggacctctatgcccgcgtttcg
ggcgtgtacaagcgtcagaacggctatgtcgaccagatcgactatggctgcgccaagccc
ggcaacccgcagggcatcagcgcgcgtcccggctccgggcaggactgcgtgatcgataag
ctgggtgaaaagggctatgccggtctgcgcggatcgctgcgctacaatccgggcgacaat
ttcgatctcgtcatcatcggtgactacacgcatgaagagcgcaccaacgctgcggaagtg
atttcgctgatcaacccggcgcgcatcaccaacgcctatgcctgcggtcgcttctgcact
tatgcgaacttctatgcccctccgggcggcttcgtcagccagggctacgaaatgccgaac
cgcctcaagttcgacggctatggcttctcggccaacatgaccatcgggctgagcgattct
ctcaacgtccagtcgatcaccgcctatcgcaactatcgccagaagtggggtaccgacgac
gacttcacgccggacctcgccattgcgggccagggctacaatgacctcaagttctggttc
ttcagccaggagctgcgcgtcaacggaaagatcggtgacaatatcgacttcaccgtcggc
ggcttctattccgaccagcgctcggtctatttcacccgccaggatatccgctacatcgca
ccgggcctgaacttccagttcctcggcaacgatccggtcaatgccgacagcaaggccgtg
ttcggcacggtcatcgcccgccccatcgaggggctgaccgtgaccggcggtctgcgctac
accgaggaagccaaggactacaccttcgtccgcaagaactatgacggcacgcgctcgatc
ttcctcggcgcgctcgatggcgtgacggcgaccttcaagggtgatcgcgtagactggcgc
gtttcggccgactaccgcttcagccccgaggtgctggcctacgtgaccgtaggcaccggc
ttcaagggcggtggcgtgactgcccgtccgttcgacgccgctcaggcattgaacggcagc
ttcgatccggaaacggtgaccgcctatgaagcgggcctgaagaccgacctgttcgaccgt
cgcctgcgcctgaacatcgccgggttcatcaacgactacaacgacatccagctgccgctg
atcagttgcgcgtcgctgggttccaacgcgccgtgcggtgcgcgccagaatgcgggcaac
ggccagatcaagggcttcgagcttgaaatgcaggcttcgccgatcgaaggcctggatatc
gatgcctcgctcagccacctgaccggcaagtacaagaacatcgacccgcgcgtgggcaac
gcgatcctgctgaccgatccgatcgtgacgccgaactggaagtacagcttcggcatccag
tatcgcgccgacctcggcagcgcgggttcgctcacgccgcgcttcgacttcgcgcacacc
ggcaagaccagcgccggtcgcatcgcggcaggcctgccgatcgaatacttcaacgcctat
gacatcggcaacgcccgcctgacctggcggaacgaggctgaggacctgtcgatctcgatg
gaagtgcagaacgtgttcaatgaatactacacgcccttccgcttcgctgcggtctatgcc
ttcaccggcacggcctacagccaggtcgggcgtccgcgcgaatgggcggtcacggtgcag
aagcgcttttga
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