Novosphingobium sp. THN1: C7W88_03155
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Entry
C7W88_03155 CDS
T05635
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
C7W88_03155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
not03019
]
C7W88_03155
03009 Ribosome biogenesis [BR:
not03009
]
C7W88_03155
04131 Membrane trafficking [BR:
not04131
]
C7W88_03155
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
not04147
]
C7W88_03155
Messenger RNA biogenesis [BR:
not03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
C7W88_03155
Ribosome biogenesis [BR:
not03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
C7W88_03155
Membrane trafficking [BR:
not04131
]
SNARE
SNARE associated proteins
Others
C7W88_03155
Autophagy
Aggrephagy
Other aggrephagy associated proteins
C7W88_03155
Exosome [BR:
not04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C7W88_03155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_2
AAA_22
AAA_33
AAA_14
TIP49
IstB_IS21
nSTAND3
AAA_28
AAA_7
RNA_helicase
AAA_18
NPHP3_N
Zeta_toxin
Mg_chelatase
AAA_3
ABC_tran
DUF815
AAA_30
AAA_17
AAA_19
AAA_24
TsaE
Sigma54_activat
AAA_11
Parvo_NS1
Bac_DnaA
NB-ARC
bpMoxR
PhoH
ATPase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AXU18254
LinkDB
All DBs
Position
complement(625747..628065)
Genome browser
AA seq
772 aa
AA seq
DB search
MADAATEARTDARTVRLQVAGARQEESGHGIARISRHVMSQLGVTEGDVIEIVGKRATAA
RVIQPYPEDEGLELIRLDGLQRANADVGSGEHVEVRKIDSRPAQRVVFAPAQKELRLQGP
AVALKRNFAGRPLVTGDLVATAGQQQVNRTDMPPQLRQMLNAPAFALTQIRLTVVSTSPK
GVVHIDENTEVELRPEYEEPRSSRADVNYDDVGGMGDTIRQLREMVELPLRYPELFTRLG
VDPPKGVLLHGPPGTGKTRLARAVANESDASFFTINGPEIMGSAYGESEKRLREVFEEAT
RNAPSIVFIDEIDSIAPKRSEVHGEAEKRLVAQLLTLMDGLHSRSNLVVIAATNRPDAID
EALRRPGRFDREIVVGVPDESGRREIIGIHTRGMPLAEDVDLQELARTTHGFVGADLAAL
SREAAIEAVRRIMPQLDFEQQTIPQDVLDNLRVERDDFLQALKRVQPSAMREVMVQAPTI
GWADIGGLDDAQDKLREGVELPLKNPEAFHRLGIRPAKGFLLYGPPGTGKTLLAKAVAKE
AEANFIAIKSSDLLSKWYGESEQQIARLFARARQVAPCVVFIDEIDSLVPARGSGQGEPN
VTARVVNTILAEMDGLEELQSVVLIGATNRPNLVDPALLRPGRFDELIYVGTPSVAGREH
ILGIHTRNMPLAGDVDLGRIAQATERFTGADLEDVVRRAGLNAIRRAGGNVDQVTAEDFA
GALDASRATVTEQMEEEYGRMKGELKKRAMNPGPLGFITPGMVTPLRESKHG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcggcaaccgaagcccggaccgatgcgcgcaccgtgcgcctgcaggtggcg
ggcgcccgtcaggaagaaagcggccacggcattgcccgcatcagcaggcacgtgatgtcg
cagctgggcgtgaccgaaggcgacgttatcgagatcgtcggcaagcgcgccaccgcggcg
cgggttatccagccctatcccgaggacgagggtctggaactgatccgcctcgatggcctc
cagcgcgccaatgccgatgtcggctcgggcgagcatgtcgaggtgcgcaagatcgattcg
cgcccggcgcagcgcgtggtcttcgcgcccgcgcagaaggaactgcgcctgcagggcccc
gccgtagcgctcaagcgcaacttcgccgggcgcccgctggtgacgggtgatctggtggcg
accgccgggcagcagcaggtcaaccgcaccgacatgccgccacagctgcgccagatgctc
aatgcgcccgcctttgcgctgacccagatccgcctgaccgtggtctcgaccagccccaag
ggcgtggtccacatcgacgagaacaccgaggtcgaactgcggcccgaatacgaggagccg
cgctcgagccgtgccgacgtcaactatgacgacgtcggcggcatgggcgataccatccgc
cagctgcgcgagatggtcgagctgccgctgcgctatcccgaactgttcacgcgcctgggc
gtcgatccgcccaagggcgtgttgctgcacggcccgccgggcaccggcaagacgcgtctg
gcgcgtgccgtggccaatgaaagcgatgcctcgttcttcaccatcaacggccccgaaatc
atgggctcggcctatggcgagagcgagaagcgcctgcgcgaggtgttcgaggaggcgacc
cgcaacgcgccgtccattgtcttcatcgacgagatcgattcgatcgcgcccaagcgcagc
gaggttcatggcgaggcggagaagcggctggttgcgcagttgctgacgctgatggacgga
ctgcacagccggtccaaccttgtcgtgatcgcggcgaccaatcgccccgatgcgatcgac
gaggcgctgcgccggcccggccggttcgaccgcgagatcgtggtcggcgtgcccgacgaa
tccggtcgccgcgagatcatcggcatccatacccgcggcatgccgctggccgaggatgtc
gatctgcaggaactggcccgcacgacgcacggctttgtcggcgccgaccttgccgccctg
tcgcgcgaggcggcgatcgaggcggtgcgccggatcatgccgcagctcgatttcgagcag
cagacgatcccgcaggacgtgctcgacaacctgcgcgtggagcgcgacgatttcctgcag
gcgttgaagcgcgtgcagccctcggcgatgcgcgaagtcatggtgcaggcgccgaccatc
ggctgggccgacatcggcgggctcgatgatgcgcaggacaagctgcgcgaaggcgtggaa
ttgcccctgaagaaccccgaggccttccaccgcctcggcatccgtccggccaagggcttc
ctgctctatggtccgcccggcaccggcaagaccctgctggccaaggccgtggcgaaggag
gcagaagccaacttcatcgcgatcaagtcgtccgacctgctgtcgaagtggtatggcgag
agcgagcagcagatcgcccggctctttgcgcgcgcgcgacaggtcgcgccctgcgtcgtg
ttcatcgacgagatcgacagcctcgttccggcacgcggcagcgggcagggcgaaccgaac
gtgacggcgcgggtggtcaacaccatccttgccgaaatggacgggctggaggaactgcag
tcggtggtgctgatcggcgcgaccaaccggccgaacctggtcgacccggcgctgctgcgc
cccggccgcttcgacgagctgatatacgtcggcacgccgagcgtcgcgggccgcgagcac
atccttggcatccacacccgcaacatgccgctggcaggcgatgtggacctcgggcggatc
gcacaggcgaccgagcgctttaccggtgccgatctcgaagacgtggtgcgccgcgcgggc
ctgaacgccattcgccgcgcgggcggcaatgtcgatcaggtcacggctgaggactttgcg
ggtgcgcttgatgcctcgcgcgcaacggtgaccgagcagatggaggaagagtacggccgg
atgaagggcgagctcaagaagcgcgcgatgaatccggggccgctgggcttcatcactccg
ggcatggtcacgcccttgcgcgaatcgaagcacggctga
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