Novosphingobium sp. THN1: C7W88_03300
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Entry
C7W88_03300 CDS
T05635
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
not03009
]
C7W88_03300
Enzymes [BR:
not01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
C7W88_03300
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
C7W88_03300
Ribosome biogenesis [BR:
not03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C7W88_03300
23S rRNA modification factors
C7W88_03300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Motif
Other DBs
NCBI-ProteinID:
AXU20470
LinkDB
All DBs
Position
complement(655930..656697)
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AA seq
255 aa
AA seq
DB search
MTSTRPPKQPGASKLRVDQLLVDRGLVESRARAQALILAGLVFSGETKIAKAGQALATDA
ALDVRGRDHPWVSRGGIKLAHAIEHFGLDPSGVTAMDIGSSTGGFTDVLLQGGAEHVFAV
DSGTNQLAWKLRQDPRVTVLEQTSARILTPGHIDRPATWVVCDASFISLRKVLEVPLSLA
ARPTRLVALIKPQFEVGKAEVGKGGVVRDPALHERVCSEVREWLESEGWAVQGIVPSPIT
GPEGNVEFLVSALRG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcaacccgccccccgaaacagcccggcgcatccaagcttcgcgtggaccagttg
ctggtcgaccgcggcctggtcgagagccgcgcgcgcgcgcaagccctgatcctggccggg
ctggtcttttcgggcgaaaccaagatcgccaaggccgggcaggcacttgccacagatgcc
gcgctggacgtgcgcgggcgcgatcacccatgggtttcgcgcggcggcatcaagctcgcc
cacgcgatcgagcatttcggcctcgacccgtccggcgttaccgcgatggacatcggcagt
tcgaccggcggcttcaccgacgtgctgctgcagggcggcgccgagcatgtctttgccgtg
gactccgggaccaaccagcttgcgtggaagctgcgtcaggacccgcgcgtcaccgtgctc
gagcagacaagcgcgcgcatcctcacgccggggcacatcgatcggccggcaacctgggtg
gtatgcgatgccagcttcatttccctgcgcaaggtgctggaagtgccgctctcgctggcg
gcaaggccgacgcggcttgtcgcgctgatcaagccgcagttcgaagtgggcaaggccgag
gtcggcaagggcggcgtggtccgcgatccggccttgcacgaacgggtgtgcagcgaggtg
cgcgagtggctggaaagcgagggctgggccgtacagggcatcgtcccgagtccgatcacc
ggccctgaaggcaacgtcgaattcctcgtttccgcgctgcgtggttga
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