Novosphingobium sp. THN1: C7W88_03335
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Entry
C7W88_03335 CDS
T05635
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00300
Lysine biosynthesis
not00470
D-Amino acid metabolism
not01100
Metabolic pathways
not01110
Biosynthesis of secondary metabolites
not01120
Microbial metabolism in diverse environments
not01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C7W88_03335 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C7W88_03335 (lysA)
Enzymes [BR:
not01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C7W88_03335 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXU18282
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Position
complement(662326..663585)
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AA seq
419 aa
AA seq
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MDHFELNNGVLCAENVPLPVIAAEVGTPVYVYSRATLTRHARVFRDALGILRDVKIAFAV
KSNPNLAVLKVLAAEGYGADVVSGGEMERALAAGMAPDGIVFSGVGKTAAEMRRGIEAGI
GQFNLESEEEGIELAEIAASMGKVASAALRVNPDVDAGTHGKISTGKAENKFGVPFDRAA
AIYGRLANTPGLNMRGLTLHIGSQLSKLEPLEAAFNKVGGLMEEIRAAGHSVTHMDLGGG
VGVPYKAGEVFPQPAEYAAMVARVTGNWGVTLMFEPGRVITGNTGVLVTEVIRVKEGASN
PWVVVDAAMNDLARPALYDAWHDFAAVEPKGDTFTANIVGPICESSDTFAMARTIDKVGR
GDLAVFRTAGAYGATMANTYNSRPLVPEVMVDGDQWAVVADRIDPATILAAERVPDFLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttgaactgaacaacggcgtgctctgcgccgagaacgtgcccctgccggtg
atcgcggcggaagtcggcacgcccgtctatgtctattcgcgcgcgacgctgacccgccac
gcccgcgtgttccgcgatgcgctgggtatcctgcgtgacgtgaagatcgcctttgcggtc
aagtccaaccccaacctcgccgtgctcaaggtcctggctgccgaaggctacggcgccgat
gtcgtctcgggcggcgagatggagcgggccttggccgcaggcatggcgcccgatggcatc
gtgttttcgggcgttggcaagaccgctgccgaaatgcgccgcggcatcgaagccgggatc
ggccagttcaacctcgagagcgaggaagaaggcatcgaacttgccgagatcgcagcgtcg
atgggcaaggtcgcttccgccgcgctgcgcgtgaaccccgacgttgacgcaggcacgcac
ggcaagatctccaccggcaaggccgagaacaagttcggcgttccgttcgaccgtgccgcc
gcgatctatggccgtctggccaacacgcccggcctcaacatgcggggcctcacgctgcac
atcggcagccagctttccaagctcgagccgctggaagccgccttcaacaaggttggcggg
ttgatggaagagatccgcgcggcgggccattcggtcacgcacatggacttgggcggcggc
gtgggcgtgccctacaaggcgggcgaagtcttcccgcagcctgccgaatatgccgcaatg
gtcgcgcgcgtgacaggcaactggggcgtgacgctgatgttcgaaccgggccgcgtgatt
accggcaacaccggcgtgctggtgaccgaggtcatccgcgtgaaggaaggggcgagcaac
ccctgggtcgtggtcgacgccgcgatgaacgatctggcgcggcctgcgctctacgatgcc
tggcacgatttcgccgctgttgagccgaagggcgataccttcactgccaatatcgtcggc
ccgatctgcgaaagctcggacaccttcgccatggcccgcacgatcgacaaggtcgggcgc
ggcgatctcgccgtgttccgcaccgcgggcgcctatggcgcgacgatggccaacacctac
aactcgcggcctctagtgcccgaggtcatggtcgatggcgaccagtgggccgtggttgct
gatcggatcgaccccgccacgatccttgccgcagagcgcgtgccggacttcctcaagtaa
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