Novosphingobium sp. THN1: C7W88_03445
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Entry
C7W88_03445 CDS
T05635
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_03445
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
C7W88_03445
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_10
DUF87
ResIII
SLFN-g3_helicase
AAA_22
AAA_16
FtsK_SpoIIIE
TrwB_AAD_bind
AAA
Hydrolase
T2SSE
AAA_19
AAA_7
CbiA
Motif
Other DBs
NCBI-ProteinID:
AXU18295
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Position
complement(691289..692863)
Genome browser
AA seq
524 aa
AA seq
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MDDIYLGLGSNGERQVLRLGRANRHGLIAGATGTGKTVTLQGIAEQFSLRGVPVFMADVK
GDLAGIAMPGSPTFKHAASLESRAKELGIEDYAYSDNPAVFWDLYGESGHPIRTTISEMG
PLLLARLMGLNDTQEGVLNIAFRYADDNALLLIDLPDLQSVLMACAENASALSGKYGNVS
KASVGTIQRQLLAFESQGADRFFGEPAFEVNDFLKVDEQGRGMVNVLAADKLMQSPKLYA
TFLLWLLSELFEALPEVGDPEKPCLVFFFDEAHLLFDDAPQALMEKVEQVVRLIRSKGVG
VYFVTQNPIDIPEKIAGQLGNRVQHALRAFTPRDQKAIRAAAETFRINKDLDVETVITEL
KVGEALVSTLNEDGSPSVVQRTLIAPPRSRLGPLSPKERAVIQSVSPFDGKYDTAVNRES
AAEVLAQKAADAAAAAQQVEEQGEEAQRASPRRTTTMWEKAGKAAAGAVASSAGAVIAAS
ITGKKSRAAPVASGVTAMVGSIATSIGGEALGRFARGILGGLLR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatctaccttggccttggttccaacggcgaacggcaggtgctgcgccttggc
cgcgccaaccgccacgggctgatcgcgggcgcgacgggtaccggcaagacggtgacgctg
cagggcattgccgaacagttctcgctgcgcggcgtacccgtgttcatggccgacgtgaaa
ggcgaccttgcgggcatcgccatgccgggaagccctaccttcaagcacgctgccagcctc
gaatcgcgggccaaggaactgggcatcgaggactatgcctattccgacaatcccgcagtg
ttctgggacctctatggcgaatctggccacccgatccgcacgaccatttccgaaatgggc
ccgctgctgctggcacggctgatgggcctgaacgatacgcaggaaggcgtgctcaacatc
gcgttccgctatgccgatgacaacgcgctgctgctgatcgaccttcccgatctgcaatcg
gtgctaatggcctgcgccgagaatgccagcgcgctttcgggcaagtacggcaacgtctcg
aaggccagcgtcggcacgatccagcgccagttgctggccttcgaaagccagggtgcggac
cggttcttcggcgaaccggcgttcgaggtgaacgacttcctgaaagtggacgagcagggc
cgcggcatggtcaatgtcctcgccgccgacaagctgatgcagagccccaagctctatgcc
acgttcctgctgtggctgctgtcggaactgttcgaggcgctgcccgaagtgggcgatccg
gagaagccgtgcctcgtgttcttcttcgacgaggcgcacctgctgttcgacgatgccccg
caggcgctgatggagaaggtggagcaggtcgtccgcctgatccgctcgaagggcgtgggc
gtctatttcgtgacgcagaacccgatcgacattccggagaagatcgcaggccagctgggc
aaccgcgtgcagcacgcgctgcgcgcgttcaccccgcgcgaccagaaggcgatccgcgcg
gcggcggagaccttccgcatcaacaaggatctcgatgtcgagacggtcatcaccgagctg
aaagtgggtgaggcgctggtctcgacgctgaacgaggatggctcgccctcggtcgtccag
cgcacgctgatcgccccgccgcgctcgcgcctcgggcctctcagccccaaggagcgcgcg
gtgatccagtcggtcagtccgttcgatggcaagtacgatactgcggtgaaccgcgaatcc
gccgccgaagtgctggcgcagaaggcggcagatgcggcagcggcggcgcagcaggtggag
gagcagggcgaagaggcccaacgcgcctcgccccgccggaccacgacgatgtgggagaag
gctggcaaggcggcggcgggcgcggtcgcctcatccgctggcgcagtgatcgccgccagc
atcaccggcaagaaatcccgcgcggcgccagtggcttcgggcgtgaccgcaatggtcggc
tcgatcgccacgtcgatcggcggcgaagcactgggccgctttgcgcgcggaattctgggc
gggttgttgcgttaa
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