Novosphingobium sp. THN1: C7W88_03595
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Entry
C7W88_03595 CDS
T05635
Name
(GenBank) autotransporter
Organism
not
Novosphingobium sp. THN1
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AXU18320
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Position
722707..725883
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AA seq
1058 aa
AA seq
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MDRLRSTTFLSTLTGASLALILVAPQAAHADTTVSTSTTAPLKTSTAGNVTVASGGTITL
GSGGTAVTVDSNNTATVASGGTISNTGGKDGDTGITIEAGRNTTVTNGGTITVTESFNGA
DTDSNGIVDGPIASASNRYGILVGAGATTTATLKNTGTITVEGLNSGGMIAKSDLTGSVS
NTGTIKVLGDNSVGIGTKGVSGNVTVEGTVAVVGAGAQGLVVDGNVGGAVRIQGAISQSS
AYTNDAGSTKTLSRTDLRTGKAAVEIGGSVAGGILLDAAPYDLDSTKTDEDNDGVADASE
VTGTITSVGNSPGILVGAASDIVIGKVKGRDGEFSLALDGNVTANAVYSNTDAYAVVIGG
KGGTVTMANGIGVSGTISATTVDQKAVAILINEGSTVPSLSNSGSIKATLSSPGEGTAYA
IQDKSGTLTSLNNTGFISVSGSSGDDLRAIDLTANTSGVTIKQYLNAIDKKAQDAEKAAS
GYNPANPTIYTSITGNIHTGSGNDVLDVASGRIFGNSFLGAGNDSVLLSGDSGYVGNIDF
GAGTATMTMGDTAFFIGKLDLAGNAGTLTLGGTSIFAGTLANSGALDVTVNGGRFGASSA
TTLKFDSLAVNSGGALNVYIDGSTGTSSLIDVNTATFASGSKVTATITSLDKAVGNYTFL
KAGTLTGSPVFDATTTQLPVLFNGAINRVGETLVLAVTRKSAAQLGLTAPQAAAYDAIYK
QGTAVTNLGSSFLQVEDAATLQGQFNQLLPDYAGGVFDFVTRSGRLASRHLMDDSSIFDI
SEVGGWLEPIYFRGTKDQTGTAAFKVKGWGLSAGLERDIGAGYLGLSFLYTKGDIATSDY
QKTDASNYELGLFWRLASGPFYAFAKASGGRVSLNSTRQFTGAVNGTALSYTANGRWKGW
TVGGQGGVSYRADLGGNLSLKPMAKFDYYRLSEKGYTESGSEQIALSVAKRTSDLLTGTG
SLTAAWSAGEVTRDERPLTLELEGGYRARLAGTLGDTVANFEDGDQFRLVADRMKSGWTS
EARLLMGGMDYTWQLAGGAEQIQGGVDYSIRASLSIAF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcttcgcagcaccacttttctgtcgacgctgactggagcgtctctggctctc
atcctcgtggcgcctcaggcggcccatgccgacaccaccgtcagcaccagcacgaccgcg
ccgctcaagacctcgaccgccggcaacgtcaccgttgccagcggcggcacgatcacgctg
ggctcgggcggcaccgcggtgacggtcgattcgaacaacaccgccaccgtcgcttctggt
ggcacgatcagcaacaccggcggcaaggacggtgataccggcatcaccatcgaggccggg
cgcaacaccacggtgaccaacggcggcacgatcaccgtgaccgaaagcttcaatggcgcc
gataccgacagcaacggcatcgtcgatggtccgatcgcctcggccagcaaccgctatggc
atccttgtcggagcgggcgcgacgaccacggcaaccctcaagaacaccggcacgatcacg
gttgagggcctcaactcgggcggcatgatcgccaagtctgacctcaccggcagcgtttcc
aacaccggcacgatcaaggtgctgggcgacaacagcgtcggcatcggcaccaagggcgtc
tcgggcaacgtcacggtcgaaggcacggtcgcagtcgtcggcgccggtgcgcagggcctg
gtcgtcgatggcaatgtcggcggcgcggtgcgcatccagggcgcgatctcgcaaagctct
gcctataccaacgatgccggctccacgaagacgctttcgcgcaccgacttgcgcaccggc
aaggccgcggtcgagatcggcggcagcgttgccggcggcatcctgctcgacgccgctccc
tatgacctcgacagcaccaagaccgacgaggacaacgacggcgtggccgatgcctcggaa
gtgaccggcacgatcacctcggtcggcaacagccccggtattctcgtcggcgcagccagc
gacatcgtgatcggcaaggtcaaggggcgcgatggcgaattctcgctcgcgctcgacggc
aacgtcaccgccaatgccgtctacagcaataccgatgcctatgccgtcgtgatcggcggc
aagggtggcaccgtgaccatggccaatggcatcggcgtttcgggcacgatcagcgcgacg
actgttgaccagaaggccgtcgccatcctgatcaacgaaggctcgacggtgcccagcctg
tcgaatagcggttcgatcaaggccacgctgtcctcacctggcgaaggcactgcctatgcc
atccaggacaagtcgggaactctgaccagcctcaacaacaccgggttcatctcggtatcg
ggctccagcggcgatgacctgcgcgcgatcgacctgaccgccaacaccagcggcgtaacg
atcaagcagtacctcaacgcgatcgacaagaaggcgcaggatgccgagaaggccgccagc
ggctacaacccggccaaccccacgatctacacctcgatcaccggcaacatccacacgggc
agcggcaacgacgtgctcgacgtggcttcgggccgcatcttcggcaacagcttcctcggc
gcgggcaacgattcggtcctgctttcgggcgacagcggctatgtcggcaacatcgacttc
ggcgcgggcaccgcgacgatgacgatgggcgacaccgccttcttcatcggcaagctcgat
cttgccgggaatgccggaacgctgacccttggcggcacctcgatcttcgccggcacgctg
gccaacagcggcgcgctcgacgtcacggtcaacggcggacgcttcggagccagcagcgcc
actactctgaagttcgacagccttgccgtgaactccggcggtgcgctcaacgtctatatc
gacggcagcaccggcacctcctcgctgatcgacgtgaacaccgcgacttttgcaagcggc
tcgaaggtcacggccacgatcacctcgctcgacaaggccgtgggcaactacaccttcctc
aaggcgggcacgctgaccggttcgccggtgttcgatgccaccaccacccagctcccggtc
ctgttcaacggcgcgatcaatcgcgtcggcgagacgctggtgctggccgtgacgcgcaag
agcgccgcgcagctgggcctcaccgcgccgcaagccgccgcctatgacgcgatctacaag
cagggcacggcggtgaccaatctcggcagcagcttcctgcaagtggaagatgctgccacg
ctgcagggccagttcaaccagctcctgcccgactatgccggcggcgtgttcgatttcgtc
acccgctcgggccgcctcgcctcgcgccatctgatggacgacagctctatcttcgatatc
agcgaagtcggcggctggctcgaaccgatctacttccgcgggaccaaggaccagaccggc
acggcggcgttcaaggtcaagggctggggcctttcggccgggctggagcgcgacatcggc
gcaggctatctcggcctgtcgttcctctacaccaagggcgatatcgccacctcggactat
cagaagaccgatgcgagcaactacgagctcggcctgttctggcgtctcgcatccggtccg
ttctacgccttcgccaaggcctcgggcggccgcgtttcgctgaattcgacgcggcagttc
accggcgccgtcaatggcacggccctgtcctacaccgccaacggccggtggaagggctgg
accgtgggcggtcagggcggcgtgtcctaccgcgccgatctcggcggcaacctctcgctc
aagccgatggccaaattcgactactaccggctgagcgaaaagggctacaccgagagcggc
agcgaacagatcgccttgtccgtcgccaagcgcacctcggatctgctgaccggcaccggc
agcctcaccgccgcgtggagcgcgggcgaggtcacccgcgacgagcgcccgctgacactg
gaactcgaaggcggctaccgcgcacgcctcgctgggacactcggcgatacagtggcgaac
ttcgaggacggcgaccagttccgcctggtggcagaccgcatgaagtcgggctggacgtcc
gaagcacgcctgctgatgggcggcatggactatacctggcagctggccggtggtgccgaa
cagatccagggcggcgtcgactactcgatccgcgcctcgctcagcatagcgttctga
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