Novosphingobium sp. THN1: C7W88_03865
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Entry
C7W88_03865 CDS
T05635
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00020
Citrate cycle (TCA cycle)
not00640
Propanoate metabolism
not00660
C5-Branched dibasic acid metabolism
not00720
Other carbon fixation pathways
not01100
Metabolic pathways
not01110
Biosynthesis of secondary metabolites
not01120
Microbial metabolism in diverse environments
not01200
Carbon metabolism
Module
not_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C7W88_03865
00640 Propanoate metabolism
C7W88_03865
00660 C5-Branched dibasic acid metabolism
C7W88_03865
09102 Energy metabolism
00720 Other carbon fixation pathways
C7W88_03865
Enzymes [BR:
not01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
C7W88_03865
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
AXU18359
LinkDB
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Position
complement(780472..781671)
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AA seq
399 aa
AA seq
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MNVHEYQAKELLAKFGVGIPAGIAALTVEEAVAAAKQLPGPLYVVKAQIHAGGRGKGKFK
ELPADAKGGVRLAKSVEEVEAFAKEMLGNTLVTVQTGEAGKQVNRLYITDGVDIAKEYYL
SMVVDRASSRVAMIVSTEGGMDIEEVAHSTPEKIATITIDPAEGFMPHHGRAVGYALKLT
GDLNKQAGKIAEQLYNAFVALDCDMLEINPLVETKDGNLLVLDTKMSFDSNSLYRHPDVV
ALRDETEEDPAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG
GGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIADGIVAAAKEVNLQVPLVVRLE
GTNVQQGKDILANSGLPIVPANDLGDAAKKIVAEVRKVA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccatgagtaccaggcgaaggaactgcttgcgaagtttggtgtcggcattccg
gcggggattgcggcgctgacggttgaggaagcggttgctgcggccaagcagcttccgggg
cctctttacgtggtcaaggcgcagatccatgcgggcggtcgcggcaagggcaagttcaag
gaactcccggccgatgccaagggcggcgtgcgcctggccaagagcgtcgaggaagtcgaa
gcgtttgccaaggagatgctcggcaacaccctcgtgacggtgcagaccggcgaggcgggc
aagcaggtcaatcgcctctacatcaccgatggcgttgatatcgcgaaggaatactacctg
tcgatggtggtggaccgcgcttcgagccgcgttgccatgatcgtctcgaccgagggcggc
atggacatcgaagaagtcgctcactcgacgccggaaaagatcgccacgatcacgatcgat
ccggccgaaggcttcatgccgcaccacggccgcgctgtcggctatgcgctcaagctcacg
ggcgatcttaacaagcaggccggcaagatcgccgagcagctctacaacgccttcgtcgcg
ctggattgcgacatgctcgagatcaacccgctggtggaaaccaaggacggtaacctcctc
gtcctcgacaccaagatgagcttcgattcgaactcgctctaccgccacccagacgttgtc
gcgctgcgcgacgagaccgaggaagacccggccgagatcgaagcgagcaagtacgacctt
gcctacatcaagctcgacggcaacatcggctgcatggtcaacggcgccggccttgccatg
gcgacgatggacatcatcaagctgaacggcgaattcccggcgaacttcctcgacgtgggc
ggcggcgcgacgaccgagaaggtcaccgcggcgttcaagatcatcctcaaggatccggcg
gtgaagggcattctcgtcaacatcttcggcgggatcatgaagtgcgacatcatcgctgac
ggcatcgtcgccgcggccaaggaagtgaacctgcaggttcccctcgtcgtccgcctcgaa
ggcaccaacgtccagcagggcaaggacatcctcgccaactcgggcctgcccatcgtcccc
gcaaacgaccttggcgatgccgccaagaagatcgtcgctgaagtccggaaggtcgcctga
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