Novosphingobium sp. THN1: C7W88_05290
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Entry
C7W88_05290 CDS
T05635
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
not03032
]
C7W88_05290
03036 Chromosome and associated proteins [BR:
not03036
]
C7W88_05290
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_05290
DNA replication proteins [BR:
not03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C7W88_05290
Chromosome and associated proteins [BR:
not03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C7W88_05290
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C7W88_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
ClpB_D2-small
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AXU18585
LinkDB
All DBs
Position
complement(1078254..1078535)
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELLQALAKESPGMRSEEIERVVDVFFDEIAKRLADGGRVELRGFGAFSTRERDARK
GRNPRTGETVEVPGKRVPYFKAGKEMRQRLNAD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgataagatcggagctgctgcaggctctcgccaaggaaagccctggcatgcgcagcgaa
gaaatcgagcgggttgtcgacgttttcttcgatgagattgccaagcgtctggctgatggc
gggcgtgtcgaacttcgtggttttggtgcgttttccacgcgcgaacgcgatgcccggaag
ggccgcaacccgcgaaccggcgaaaccgttgaagtaccgggcaagcgcgtgccctatttc
aaggcaggcaaggaaatgcggcaacggctgaacgccgactga
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