Novosphingobium sp. THN1: C7W88_05930
Help
Entry
C7W88_05930 CDS
T05635
Name
(GenBank) tRNA 2-thiouridine(34) synthase MnmA
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
not
Novosphingobium sp. THN1
Pathway
not04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C7W88_05930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
not03016
]
C7W88_05930
Enzymes [BR:
not01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
C7W88_05930
Transfer RNA biogenesis [BR:
not03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
C7W88_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
PGM1_C
GLOD4_C
Motif
Other DBs
NCBI-ProteinID:
AXU20528
LinkDB
All DBs
Position
complement(1196831..1197970)
Genome browser
AA seq
379 aa
AA seq
DB search
MLDTATLPDLFDLPQPLKARRIVVAMSGGVDSSVVAGIAAASGAEVIGVTLQLYDYGAAT
GRKGACCAGDDIRDARAVADRLGIAHYVFDHESSFREEVVERFADDYLNGRTPIPCVRCN
MGPKFTDLLAMARELGADCLATGHYVRRVVGADGPELHRAFDPARDQSYFLYGTTEAQLD
FLRFPLGGLPKTETRRIAEDMGLVVAAKPDSQDICFVPDGDYARIVRSVRPEGDAPGEIV
HAATGEVLGHHRGIIHYTVGQRRGLEIGGQPEPLYVIGLDAPQRRVLVGPRPMLAVSRAT
ITETNRIGPLPAGPLTAKVRSLAKPVPVELDGPFGEGATATIRFLQPEYGVAPGQAAVLY
AGERVIGGGWIDSTKRWDA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatacggcaacacttcccgatcttttcgacctgccgcaaccgctcaaggcgcgg
cgcatcgtcgtcgccatgtcgggcggcgtcgacagctcggtcgtcgcgggaatcgctgca
gcaagcggggccgaagtgatcggcgtaaccctgcaactttacgattatggcgcggcaacc
gggcgcaagggtgcctgctgcgccggtgatgacatccgcgatgcgcgcgccgtggccgac
cgcctgggcatcgcgcactatgtcttcgatcacgaatcgagcttccgcgaggaagtggtc
gaacgctttgcagacgattatctcaacggtcggactccgattccctgcgtccgctgcaac
atggggccgaagtttaccgatctgctggcaatggcgcgcgaacttggcgcagattgcctt
gccaccggccactacgtgcgccgcgtggtcggtgctgacggccccgaactccaccgcgcg
ttcgatcccgcgcgcgaccagtcctactttctctatggcacgaccgaggcccagctcgat
ttcctgcgctttcctttaggcggattgcccaagaccgagacgcggcgcatcgccgaggac
atgggcctcgtcgtcgccgccaagcccgacagccaggacatctgcttcgtgcccgatggc
gactacgccagaatcgtccgttcggtacgccccgagggcgatgcgccgggcgagatcgtc
catgccgccactggcgaagtgctcgggcaccatcgcggcatcattcactataccgtcggc
cagcgacgcggcctcgagatcggcgggcagcccgaaccgctctacgtgatcggcctcgac
gcaccgcagcgccgcgtgctggtgggaccgcgcccgatgctggccgtcagccgcgcgacg
atcacggaaaccaaccgcatcggcccgctcccggcaggcccgctgacggcaaaggtgcgc
tcgctggccaagcccgtcccggtcgaactcgatggcccgttcggcgaaggcgccactgca
acgattcgcttcctgcagcccgaatacggcgtcgccccggggcaggccgcagtgctctat
gcgggcgagcgggtgatcggcggcggctggatcgattcgaccaagcgttgggacgcctga
DBGET
integrated database retrieval system
