KEGG   Novosphingobium sp. THN1: C7W88_06165
Entry
C7W88_06165       CDS       T05635                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
not  Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:not00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:not03400]
    C7W88_06165
Enzymes [BR:not01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C7W88_06165
    5.6.2.6  RNA 3'-5' helicase
     C7W88_06165
DNA repair and recombination proteins [BR:not03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C7W88_06165
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AXU18719
LinkDB
Position
complement(1250928..1253342)
AA seq 804 aa
MTLAPSITDWFESRGWRVRRHQSEMLDAARAGDHALLVADTGAGKTLAGFLPTLQDFAGD
DPPGDGLHTLYVSPLKALAHDVQRNLLTPIEDIGLPIRVETRSGDTPSDRKARQRAKPPH
VLLTTPESLSLLLSYPEAATMFAGLRRVIVDEVHAFATGKRGDLLALSLARLQAIAPEMR
RAALSATVADPQDFCAWLAPDGDASSVRLVEGEAGAKPELSIMNPEDERVPWGGHAAAWA
VPQLYEEIKRNQTTLIFTNTRFLAEYIFQLLWDINDDHLPIGIHHGSLSKEARRKVEGAM
ARGELRALVCTASLDLGVDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDCPSRALLAPG
NRFEFLEAFAAQEAVHEGRRDGEDFRPGGLDVLAQHVMACACAGPFDEKALHAEVRSAHP
YRWVDEEQWQRVLEFVATGGYALRAYDRFKRIVRDRHGIWRLTHPEHAARHRLNAGIIVD
SEMLEVRFRNGRSLGKVEESFGATLSPGDTIRFAGMDLEVEGVRDLELIVRAAKKPGQIP
SYMGARLPLTTHLSDRVRGLMVDRAGWSRFPDDVREWLEMQDWRSRLPGPGMLLAESFPH
QNKHYTVYYTFEGWNANQSLGMLITRRMNELGLVPLGFVANDYSLAVWGARPVADPAPLL
SPDILAHEFVEWVQESHLLRRAFREVAVISGLVERQHPGKRKTGKQVTFSTDLIYDVLRK
YEPDHLLLQAAWADARARMTDVGRLGDLLDRAQGQLVHVELDRVSPLAVPVLVMIGRETT
PAGAADDELLVEAESLAAAAMRAD
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgacactcgctccctcgataacagactggttcgaaagccgcggctggcgggtgcggcgg
catcagagcgagatgctagacgcggcgcgcgcaggcgatcatgcgctgctggtggccgat
accggcgcgggcaagacgctggcggggttcctgcccacactgcaggatttcgcaggcgat
gatccaccgggcgacggcctgcacacgctctatgtctcgccgctgaaagcgctggcgcat
gacgtgcagcgcaacctgctcacccccatcgaggacatcggcctgccgatccgggtggaa
acccgcagcggggatacgccgtcggaccgcaaggcacggcagcgcgccaagccgccgcac
gtgctgctgacgacccccgaatcgctgtccctgctgctgagctatccggaagcggcgacg
atgtttgcagggctcaggcgcgtgatcgtcgacgaggtccacgccttcgccaccggcaag
cgcggcgatcttctggcgctgtcgctggcgcggctgcaggccatagcgcccgagatgcgg
cgcgcagcgctttcggcgacggtggccgatccgcaggacttctgcgcatggctcgccccc
gatggcgatgcatcttccgtgcggctggtcgagggcgaggcgggggccaagcccgagctt
tcgatcatgaaccccgaagacgaacgcgtgccttggggcgggcacgccgcagcctgggcc
gtgccgcagctttacgaagagatcaaacgcaaccagaccacgctgatcttcaccaacacg
cggtttctggccgaatacatcttccagctgctgtgggacatcaacgacgatcacctgccc
atcggcatccaccacggctcgctgtccaaggaagcgcggcgcaaggtcgaaggggcgatg
gcgcggggcgaattgcgcgcgttggtctgcaccgccagcctcgatctcggcgtggactgg
ggcgatgtcgatctggtcgtgcagatgggcgcgcccaagggctcctcgcgcctgctccag
cgcatcggccgcgcgaaccaccggctcgattgccccagccgcgccctcctcgcgcccggc
aaccgctttgaatttctcgaagccttcgccgcgcaggaagcggtccacgaagggcggcgc
gatggcgaggacttccgcccgggcgggctcgacgtgctggcgcagcacgtcatggcctgc
gcctgtgcggggccgttcgacgagaaggcgctccatgccgaagtgcgctcggcccatcct
taccgctgggtcgacgaggagcagtggcagcgcgtgctcgagttcgtggcgaccggcggc
tacgccctgcgcgcctacgaccgcttcaagcgcatcgtgcgcgaccggcacggcatctgg
cggctgacccaccccgaacacgccgcgcgccacaggctcaacgccgggatcatcgtcgat
tccgaaatgctggaggtgcgcttccgcaacggccgctcgctgggcaaggtcgaggaaagc
ttcggggcgacgctgtctccgggcgacaccatccgctttgccggcatggacctcgaagtc
gaaggcgtgcgcgatctcgaactgatcgtgcgcgcggcgaagaagccgggccagatcccc
agctacatgggcgcacgcctgccgctgaccacgcacctgtccgatcgcgtgcggggcctg
atggtcgaccgcgcgggctggtcacgcttcccggacgacgtgcgcgaatggctggagatg
caggactggcgcagccgcctgccggggccgggcatgctgctggccgagagttttccgcac
cagaacaagcactacaccgtctactacaccttcgagggctggaacgcgaaccagtccttg
ggcatgctcatcacacggcgcatgaacgaactggggctggtgccgctcggcttcgtcgcc
aacgactactcgcttgccgtctggggcgcgcggcccgtggccgatcccgcgccgctgctc
tcgcccgacattcttgcccacgaatttgtcgaatgggtgcaggaatcgcacttgctgcgc
cgcgccttccgcgaagtggcggtgatctcgggccttgtcgagcgccagcatcccggcaag
cgcaagactggcaagcaggtgaccttctcgaccgacctgatctacgacgtgctgcgcaag
tacgagcccgaccacctgctgcttcaggccgcctgggccgatgcccgcgcgcgcatgacc
gacgtcggccgtctcggcgacctgctcgaccgcgcgcaagggcaattggtccacgtcgaa
ctcgaccgtgtcagcccgctcgcagtgccggtcctggtaatgatcggccgcgaaaccacg
cccgcgggcgcggcggatgacgaacttctggtcgaggccgagagccttgcggcggcggcg
atgcgggcggactag

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