Novosphingobium sp. THN1: C7W88_07060
Help
Entry
C7W88_07060 CDS
T05635
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C7W88_07060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
not01007
]
C7W88_07060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
not03016
]
C7W88_07060
Enzymes [BR:
not01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
C7W88_07060
Amino acid related enzymes [BR:
not01007
]
Aminoacyl-tRNA synthetase
Class II (U)
C7W88_07060
Transfer RNA biogenesis [BR:
not03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C7W88_07060
Prokaryotic type
C7W88_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AXU18855
LinkDB
All DBs
Position
complement(1432596..1434986)
Genome browser
AA seq
796 aa
AA seq
DB search
MKFSLSWLKSVLDTKADARTIAEKLTSLGLEIEGVEDASAALKSFRVARVLTAEKHPQAD
KLQVLSVDLGDGNPLQVVCGAPNARAGLVGVLGLPGAVVPANGMELRKSAIRGVESNGMM
CSTRELGLGEEHDGIIELPEDAPLGTTFADYLGSDPVFDVAITPNRPDCMGVHGIARDLA
AAGLGVLQPIAAAHVAGSFPCPIEVRTDDPEGCPAFYGRVVRGVKNGPSPKWLQDCLKSA
GQRPISALVDITNYVMLGYGRPAHAYDMAKLSGAVVARKAREGETCLALNGKEYALQPWM
TVIADDAGVHDIAGIMGGEHSGCSDETTDVLLEVAYFDPASIARTGQALSLTSDARGRFE
RGVDPAFLDTGLDLLTKLILDICGGEPSEVVRAGQPPLARKAVAYDPALAGNLGGIDVAN
GEQKRILAALGFEVAHDWTVTVPTWRPDVDGAPDIVEEVIRVHGLDAVPSTPLPRADGVA
KPTATAVQSLERRVRRAAASRGLHEAITWSFLPEKEAAHFADGEETWALANPISEDLKVM
RPSLLPGLLSAAQRNLHRGATSVRLFEIGRRYLRGANGASDEKLSLAVVLAGESLSRGWA
TGKARPFDAFDAKAEALSLLAEAGAPVDNLQVMGEAGAQFHPGQSATLRLGPKQVLARFG
MLHPSTAKAFDLDGPVAVVELFLDRIPPRKGPGQFARPHFAPPALQAVTRDFAFLVAASV
PAGDLLRAVKGADKQAIVSARIFDDFRGAGVPEGHKSLAIEVTLQPVEKSFDEAALKAIS
EKVVAAAVKLGGVLRG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttctcgctctcgtggttgaagtcggtcctcgataccaaggccgacgcccgcacc
atcgccgaaaagctgacctcgctggggctggagatcgaaggcgtcgaggatgcctcggcc
gcgctcaagagcttccgcgtcgctcgcgtgctgacggcggagaagcacccccaggccgac
aagctgcaggtgctctcggttgatctgggtgatggcaatccgctgcaggtcgtctgcggc
gcgcccaatgcgcgcgctggcctcgtcggcgtgctcggccttcccggcgcggtggttccg
gccaatggcatggaacttcgcaagtcggccatccgtggcgtcgaatccaacggcatgatg
tgttcaacgcgcgagcttggccttggcgaagagcacgacggcatcatcgaactacccgag
gatgcgccgctgggcacgacctttgccgattacctcggctcggacccggtgttcgacgtg
gcgatcacccccaaccgcccggactgcatgggcgtccacggcattgcgcgcgacctcgcg
gcggctggccttggcgtgctgcaaccgatcgcggcggcgcacgttgcgggcagcttccct
tgcccgatcgaggtgcgcaccgacgatcccgaaggctgccccgccttctatggccgtgtc
gttcgcggcgtgaagaatggccccagcccgaagtggctgcaggactgcctgaagagcgcg
ggccagcgtccgatctcggcgctggtggacatcaccaactacgtcatgctcggctacggt
cgtccggcccatgcctatgacatggccaagctttcgggcgcggtcgtcgcccgcaaggcg
cgtgagggcgagacctgcctggcgctgaacggcaaggaatacgcgctgcagccgtggatg
acagtgatcgccgacgatgccggcgtacacgacatcgccgggatcatgggcggcgaacat
tcgggctgctcggacgagacgacggatgtgctgctcgaagtcgcgtacttcgatcccgct
tccatcgcccgcaccgggcaggccctctcgctcacctccgacgcgcgcgggcggttcgaa
cgtggcgtcgatccggcgttcctcgataccgggctcgacctgctgaccaagctgatcctc
gacatctgtggcggcgagcccagcgaagtggtccgtgcaggccagcctccgctggcgcgc
aaggccgtcgcttacgatccggctctcgctggcaacctcggcggcatcgacgttgccaat
ggcgagcagaagcgcatcctcgccgcgctcggcttcgaagtcgcccacgactggaccgtg
accgtcccgacctggcgccccgacgtcgacggcgcgcctgacatcgtcgaggaagtgatc
cgcgttcacggcctcgacgccgtgccctccaccccgctgccccgcgccgatggcgtggcc
aagccgacggcaacggcggtgcagtcgctcgagcgccgggtgcgccgtgccgcggcttcg
cgcgggcttcatgaggcgatcacctggtcgttcctgcccgagaaggaagccgcgcacttt
gccgatggcgaggaaacctgggcgctggccaatccgatttcggaagacctcaaggtcatg
cggccctcgctgctgccgggcctgctctcggcagcgcagcgtaacctccatcgcggtgcc
acctcggtgcgcctgttcgaaatcggccgccgctatctccgtggtgccaatggcgcgagc
gacgaaaagctgagccttgcggttgttcttgccggcgaatccctctcgcgcgggtgggcg
actggcaaagccaggccgttcgacgcgttcgacgccaaggccgaagcgctgtcactactg
gccgaggctggcgctccggtcgacaacctgcaggtcatgggcgaggcgggcgcgcagttc
caccccggccagtcggccaccctgcgccttggccccaagcaggtgctggcgcgcttcggg
atgctgcatccttcgaccgccaaggccttcgacctcgatggtccggtggcggtggtcgag
ttgttccttgaccgcattcccccgcgcaagggcccgggccagttcgcccgcccgcacttc
gccccgcccgcgcttcaggcggtgacgcgcgacttcgcgttccttgtcgcggcctcggtc
ccggcaggcgatctgctgcgcgcggtcaagggtgcagacaagcaggcgattgtttccgct
cgcatttttgacgatttccggggcgctggcgtacccgagggccataagagcctggccatc
gaagtcacgctgcagccggtcgagaagtcgttcgacgaagcggcgctgaaggcgatttcg
gagaaggtggtggcggctgctgtcaagctcggcggtgtcttgcgcggatga
DBGET
integrated database retrieval system
