Novosphingobium sp. THN1: C7W88_07315
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Entry
C7W88_07315 CDS
T05635
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C7W88_07315 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
not01007
]
C7W88_07315 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
not03016
]
C7W88_07315 (trpS)
Enzymes [BR:
not01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
C7W88_07315 (trpS)
Amino acid related enzymes [BR:
not01007
]
Aminoacyl-tRNA synthetase
Class I (G)
C7W88_07315 (trpS)
Transfer RNA biogenesis [BR:
not03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C7W88_07315 (trpS)
Prokaryotic type
C7W88_07315 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AXU18876
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All DBs
Position
1484200..1485219
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AA seq
339 aa
AA seq
DB search
MRIVSGIQPTGNLHLGNYLGAIRNWVRMQDEWSAKGGQCLYFLADLHAISMPHSPAELAA
NTREMVAALVSCGIDPDKSILFNQAQVPAHAELQWLLNGTARMGWLNRMTQWKDKAGKNR
EGASVALFTYPVLQAADVLLYQATHVPVGEDQKQHLELARDIAQKFNNDFCAEDAPLFTL
PDPIIPPEAARIMSLRDGSAKMSKSDPSDMSRINLTDDADAIMQKVKKAKTDPEPLPGTV
EGLAGRPEANNLVGIYAAMAGTTPAAVLAQFEGKGFGQFKPALGELLVETLSPMAARYRQ
LRQDGEALDAILAKGALKARDLAAPTLRQTYQALGLVRG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgtttccggcatccagccaaccggcaatctccaccttggcaattacctgggt
gcgatccggaattgggtgcgcatgcaggacgagtggtcggccaagggcgggcagtgcctc
tatttccttgccgatcttcacgcgatctcgatgccgcattcgcccgctgagcttgccgcc
aacacccgcgagatggtggcggcgctggtttcgtgcgggatcgatcccgacaagtcgatc
ctgttcaaccaggcgcaggtgcccgcccatgccgaactgcaatggctgctcaacggcacg
gcgcgtatgggctggctcaaccgcatgacgcagtggaaggacaaggcgggcaagaaccgc
gagggcgcgtccgtcgcgctgttcacctatccggtgctgcaggcggctgacgtgctgctc
taccaggcgactcacgtgccggtgggcgaggaccagaagcagcatctggaactggcgcgc
gacatcgcgcagaagttcaacaacgacttctgtgccgaggacgcaccgctgttcacgctg
cctgatccgatcattccgccagaggcggcgcgcatcatgagcctgcgcgatggcagcgcc
aagatgagcaagtccgatccttcggacatgagccgcatcaacctgaccgacgatgccgat
gcgatcatgcagaaggtgaagaaggccaagaccgatcccgagccgctgccgggcacggtg
gagggcctcgccgggcggcccgaggcgaacaacctcgtcggcatctatgcggcgatggcc
gggaccaccccggccgcagtgctggcgcaattcgagggcaagggcttcggacagttcaag
ccggcgctgggcgaactgctggtcgagacgctgtcgccgatggcggcgcgctatcgccag
ttgcgccaggacggcgaggcgctggacgcgattctggccaagggcgcgttgaaggcgcgg
gatctggcagcgccgacgctcaggcagacctatcaggcattgggccttgtaaggggctga
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