Novosphingobium sp. THN1: C7W88_07900
Help
Entry
C7W88_07900 CDS
T05635
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
not03110
]
C7W88_07900 (clpB)
Chaperones and folding catalysts [BR:
not03110
]
Heat shock proteins
HSP100
C7W88_07900 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
nSTAND3
Sigma54_activat
IstB_IS21
AAA_23
AAA_18
AAA_25
AAA_7
AAA_24
ABC_tran
bpMoxR
TniB
NACHT
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AXU18969
LinkDB
All DBs
Position
1586769..1589348
Genome browser
AA seq
859 aa
AA seq
DB search
MNLEKFTDRAKGFLQAAQTVAIRMNHQRITPDHILKALLEDSEGMASGLIQRAGGNAALA
QTEVDKALAKIAAVSGSGAQQTPGLDNDAVRVLDSAEQIAAKSNDSFVTVERMLVALTLA
TTTSAGQALKAANVTPQALEAAITQLRGGRTADSASAENAYDAMKKYARDLTEAAREGKL
DPVIGRDEEIRRTVQILARRTKNNPALIGEPGVGKTAIAEGLALRIANGDVPDSLRDRTL
MALDMGSLIAGAKYRGEFEERLKAVLDEVKGAEGQIILFIDEMHTLIGAGKSEGAMDAGN
LLKPALARGELHCIGATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTISILRGIKDKY
ELHHGVRIADNAIVAAATLSNRYISDRFLPDKAIDLMDEAASRIRMEVESKPEEIEKLDR
RIIQMKIEEMALAKETDTASKDRLATLREELANFEQQSAELTTRWQNERDKIAAEGKVKE
ALDAARSELDVAQRNGDLAKAGELAYGRIPELERQLAEAQGVSQNAMLREEVTAEDIAAV
VSKWTGVPVDRMMEGEREKLLKMEEVLGQRVIGQKDAVLAVSKAVRRARAGLQDPNRPLG
SFLFLGPTGVGKTELTKALAGFLFDDDNAMVRIDMSEFMEKHSVSRLIGAPPGYVGYDEG
GVLTEAVRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVDFTNTLIILTSN
LGSQYLANLEEGQDVQTVEPQVMDVVRGHFRPEFLNRLDEIILFHRLGQEHMAPIVEIQV
ARVARLLKDRKIVLDLTDAAKRWLGRVGYDPVYGARPLKRAVQRYLQDPLAEKLLGGEVP
DGSTVRIDEGDGALSFVVE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgagaaattcaccgaccgcgccaagggcttcctgcaagccgcgcagaccgtt
gcgatccgcatgaatcatcagcggatcacgccggaccatatcctcaaggccctgctggaa
gacagcgagggcatggccagcgggctgatccagcgcgcgggcggcaatgcggccctggcg
cagaccgaagtcgacaaggcgctggcgaagattgccgccgtctccggctcgggcgcgcag
cagacgccgggcctcgacaacgatgccgtgcgcgtgctcgattctgccgagcagatcgcg
gccaagtcgaacgacagcttcgtgactgtcgagcgtatgctcgtcgcgctgacgctcgcc
accacgacttcggcggggcaggcgctgaaggctgcgaacgtcacgccgcaggcgctcgag
gcggcgatcacgcagctgcgcggcgggcgcacggcggacagcgccagcgccgaaaacgcc
tatgatgcgatgaagaagtatgcgcgcgacctgaccgaggccgcgcgcgagggcaagctc
gatccggtgatcggccgcgacgaggagatccgccgcaccgtgcagatcctcgcccgccgc
accaagaacaacccggcgctgatcggcgaaccgggcgtgggcaagactgctattgccgag
ggcctcgccctgcgcatcgccaatggcgacgtgccggattcgctgcgtgaccgcacgctg
atggcgctcgacatgggcagcctgattgcgggcgcgaagtatcgcggcgagttcgaggag
cggctcaaggcggtgcttgacgaggtcaagggcgcggaaggccagatcatcctgttcatc
gacgagatgcacaccctgatcggggcgggcaagagcgagggcgcgatggatgcgggcaac
ctgctcaagcccgcgctcgcccgcggggagctgcactgcatcggcgcgacgacgctggac
gaataccagaagtatgtcgagaaggaccctgcgttgcagcggcggttccagccggtgttc
gtgggcgagccgacggtggaggacacgatcagtatcctgcgcggcatcaaggacaagtac
gaactgcaccatggcgtgcgcattgccgacaatgcgatcgtggcggcggcgaccctgtcc
aaccgctacatctccgaccgcttcctgcccgacaaggccatcgacctgatggacgaagcg
gcgagccgcatccgcatggaagtggaaagcaagcccgaggagatcgagaagctcgaccgc
cgcatcatccagatgaagatcgaggaaatggcgctggccaaggagaccgataccgcgtcg
aaggaccggctggcgaccttgcgcgaggagctggcgaacttcgaacagcaatcggccgag
ctgaccacgcgctggcagaacgaacgcgacaagatcgctgccgagggcaaggtgaaagag
gccctcgacgccgcgcgcagcgagctggacgtggcgcagcgcaatggcgacctggcgaag
gccggggagcttgcctatggccgcattcccgagctggagcgtcagctggcagaagcccag
ggcgtgagccagaacgcgatgctgcgcgaggaggtgaccgccgaggacatcgctgccgtc
gtcagcaagtggaccggcgtgccggttgaccgcatgatggaaggcgagcgcgagaagctg
ctcaagatggaagaagtgctcggccagcgggtgatcgggcagaaggacgcggtgcttgcc
gtgtccaaggcggtgcgccgtgcgcgtgccggcctgcaggacccgaaccgtccgctcggc
agcttcctgttcttgggccccacgggcgtgggcaagaccgagctgaccaaggcgctggcc
ggcttcctgttcgacgatgacaacgcgatggtccgcatcgacatgtcggagttcatggag
aagcactcggtcagccgccttatcggcgcgcctccgggctatgtcggttatgacgagggc
ggggtgctgaccgaggcggtgcggcgcaggccctatcaggtcgtgctgttcgacgaggtc
gagaaggcgcactcggacgtgttcaacgtgctgctgcaggtgcttgacgatggccgcctg
accgacgggcagggccgcgtggtggacttcaccaacacgctgatcatcctgaccagcaat
ctcggcagccagtacctcgccaatctggaagaggggcaggatgtgcagaccgtcgaaccg
caggtgatggacgtggtgcgcgggcatttccggcccgagttcctcaaccgcctggacgag
atcatcctgttccaccgtctgggccaggagcacatggcaccgatcgtcgagatccaggtg
gcgcgggtggccaggctgctcaaggatcgcaagatcgtgctggacctgaccgatgcggcc
aagcgctggctgggccgggtcggctacgatccggtctatggcgcgcggcccttgaagcgg
gcagtgcagaggtatctgcaggacccgctggccgagaagctgctgggcggcgaagtgccg
gacggttcgaccgtgcgcatcgacgagggcgatggggctttgagtttcgtcgtcgagtga
DBGET
integrated database retrieval system
