Novosphingobium sp. THN1: C7W88_07915
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Entry
C7W88_07915 CDS
T05635
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
not03021
]
C7W88_07915 (rpoH)
Transcription machinery [BR:
not03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7W88_07915 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Caudo_TAP
DUF1870
CR4_N
Motif
Other DBs
NCBI-ProteinID:
AXU18972
LinkDB
All DBs
Position
1592733..1593632
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AA seq
299 aa
AA seq
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MSEERKAVTVPALGGEASLNRYLSEIRKFPVLTAEQEYMLAKRFQEHQDPEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIKASMQEFI
LRSWSLVKMGTTAAQKKLFFNLRRMKKNLEAFEDSDLHPDDVRKIATDLGVPEQEVVNMN
RRMMMGGDASLNVSMREDGEGSWQDWLTDDRPLQDETVAEAEEASYRHQLLVEAMDSLNE
RERHILTDRRLVDEPKTLEELSQVYNVSRERVRQIEVRAFEKLQKAIQRIAVERKLLPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaggaaagaaaagctgtgacagtacctgcccttggcggggaagccagcctcaac
cgctatctctcggaaatccgcaagttccccgtgctgacggctgagcaggaatacatgctc
gccaagcgtttccaggaacaccaggatcccgaagctgccgcgcagctggtgacgagccac
ctgcgtctcgtggcgaagatcgccatgggctatcgtggctatggcctgccggtcagcgag
ctgatctccgaaggcaacatcggcctgatgcagggcgtgaagaagttcgagcccgaccgg
ggcttccgtctggccacctatgcgatgtggtggatcaaggcttcgatgcaggaattcatc
ctgcgctcgtggagcctcgtcaagatgggcaccacggcggcgcagaagaagctgttcttc
aacctgcgccggatgaagaagaacctcgaggcgttcgaggattccgacctgcatccggac
gacgtgcgcaagatcgcgaccgacctcggcgtgcccgagcaggaagtggtcaacatgaac
cggcgcatgatgatgggcggcgatgcctcgctcaacgtctcgatgcgcgaggacggcgag
ggttcgtggcaggactggctgaccgacgaccgcccgctgcaggacgagaccgtggccgag
gccgaggaggcaagctatcgccaccagctgctggtcgaggcgatggacagcctgaacgag
cgcgagcgccatatcctgaccgaccgccgtctggtcgacgagccgaagacgctggaagaa
ctgtcgcaggtctacaatgtcagccgcgagcgcgttcgccagatcgaggtgcgggcattc
gagaagctgcagaaggcgatccaacggatcgcggtggagcgcaagctgctgccggcctga
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