Novosphingobium sp. THN1: C7W88_07945
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Entry
C7W88_07945 CDS
T05635
Name
(GenBank) hypothetical protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
not
Novosphingobium sp. THN1
Pathway
not02020
Two-component system
not02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
not00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C7W88_07945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C7W88_07945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
not03000
]
C7W88_07945
Transcription factors [BR:
not03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
C7W88_07945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
MarR_2
MarR
HVO_A0261_N
HTH_24
Crp
HTH_IclR
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
AXU18978
LinkDB
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Position
1602103..1602753
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AA seq
216 aa
AA seq
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MVPDDVQAVLALHGRQMRVRKGQVLLAVGLPATDVYVVLEGSVSVSLVSAQGRETVLRAI
GAREMFGELAAIDGEPRSADVVAAENSTLLVIPGPTFTGLLGVEPVLSLWLARYLSHQVR
YLTNRIYELSTMGVGPRLQAELLRLAGEPDQSGAATINRIPTQAELAARIGTNRETVTRE
FSLLIKEGLVTREGRRIVVPSVARLADRLHRYSQSS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggtgccggatgatgtccaggcagttcttgctcttcacgggcggcagatgcgcgtgcgc
aaggggcaggtcctgcttgcggtgggtctgccagcgaccgacgtctacgtcgtgctggaa
ggcagcgtcagcgtctcgctcgtttcggcgcaggggcgcgagacggtgctccgggccatc
ggcgcgcgggagatgttcggggaattggccgcgatcgacggggagccgcgctcggccgac
gtggtcgcggctgagaacagtacgctgctggtcattcccgggccgacctttaccggcctg
ctgggcgtggagccggtcctgtcgctgtggctggcgcggtacctctcgcaccaggtccgc
tacctgaccaaccgcatctacgagctttcgacgatgggcgtcgggccgcgcctgcaggcc
gaattgctgcggctggcgggtgagccggaccagtccggcgccgccacgatcaatcgcatt
ccgactcaggccgaacttgccgcccgcatcggcaccaaccgcgaaaccgtgacgcgcgaa
ttctcgctgctgatcaaggaagggctggtcacgcgcgaagggcggcgcatcgtcgtgcca
tcggtggcgcggctggccgaccggctgcatcgttattcgcagagcagttga
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