Novosphingobium sp. THN1: C7W88_09225
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Entry
C7W88_09225 CDS
T05635
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
not
Novosphingobium sp. THN1
Pathway
not03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
C7W88_09225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
not03011
]
C7W88_09225
Ribosome [BR:
not03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
C7W88_09225
Bacteria
C7W88_09225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
RNase_II_C_S1
CsrA
RuvA_N
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AXU19172
LinkDB
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Position
complement(1844352..1846058)
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AA seq
568 aa
AA seq
DB search
MATNPSRDDFAALLDESLGGAANGGFEGRVVKGTITAIENDKAVIDVGLKSEGRVALREF
AAPGQAHGLKVGDEVEVYVDRVENADGEAMLSRDRARREAAWDKLENEFGEGKRVEGVIF
GRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDMPQPFQILKMDRRRGNIVVSRRAV
LEETRAEQRSGLIQNLKEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPSE
VIAIGDTVKVQIIRINQDTQRISLGMKQLESDPWDGVAAKYPVGAKLSGTVTNITEYGAF
VELEAGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVLVLEVDSDKRRISLGLKQAQQNP
WEAFAEKHPVGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKGE
QVSAVVLDVDVEKERISLGMKQLEKGAPAAGGVSAAGAGSLRRGEVVTVTVLEVRDGGLE
VQAGEDGATGFIKRSDLGRDRDEQRPDRFQVGQKLDAMVTGFDRSKKPNFSVKARQLAEE
KEAVEQYGSSDAGASLGDILGAALKAKQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacccgtcgcgcgacgatttcgccgcgctgcttgacgaatcgcttggcggc
gccgccaacggtggcttcgaaggccgcgtcgtcaagggcaccatcaccgccatcgaaaac
gacaaggccgtcatcgacgtgggcctgaagagcgagggccgcgttgccctgcgcgaattc
gccgcccccggccaggcgcacggcctcaaggtcggcgacgaagtcgaagtctacgtcgac
cgcgtcgagaacgctgacggcgaagcaatgctcagccgcgaccgcgcccgccgcgaagcc
gcctgggacaagctcgagaacgaatttggcgaaggcaagcgcgttgaaggcgtgatcttc
ggccgcgtgaagggcggcttcaccgtcgacctcgacggcgccgtggccttcctccccggc
tcgcaggtagacatccgcccggtccgcgacgtgaccccgctgatggacatgccgcagccc
ttccagatcctcaagatggaccgccgccgcggcaacatcgtcgtctcgcgtcgtgcggtg
ctggaagaaacccgcgccgaacagcgttcgggcctgatccagaacctcaaggaaggccag
atcatcgacggcgtggtcaagaacatcaccgattacggtgcgttcgtggacctcggcggc
atcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccgtcggaa
gtcatcgccatcggcgataccgtcaaggtgcagatcatccgcatcaaccaggatacgcag
cgcatcagcctcggcatgaagcagcttgaaagcgatccgtgggatggcgttgccgccaag
tacccggtcggtgcgaagctctcgggcaccgtcaccaacatcaccgaatacggtgcgttc
gtggaactcgaagccggcatcgaaggcctcgtccacgtttcggaaatgtcctggaccaag
aagaacgtccaccccggcaagatcgtctcgacctcgcaggaagtcgacgtgctggttctg
gaagtcgacagcgacaagcgccgcatcagcctcggcctcaagcaggcccagcagaacccc
tgggaagcctttgcagaaaagcacccggtcggttcgaccgtggaaggcgaagtcaagaac
gcgaccgaattcggcctgttcatcggcctcgatggcgacgtcgacggcatggtccacatg
tcggacatcgcctggggcatctcgggcgaagacgcgctggctctgcaccgcaagggcgag
caggtttcggccgtggttctcgacgtcgacgtcgagaaggaacgcatcagcctcggcatg
aagcagcttgaaaagggcgctccggctgctggtggcgtttcggctgccggtgctggctcg
ctgcgtcgcggcgaagtcgtcaccgtcaccgtactcgaagtccgcgatggcggcctcgaa
gtgcaggctggcgaagacggcgcaaccggcttcatcaagcgctcggatctgggccgcgac
cgtgacgaacagcgtccggaccgcttccaggtcggccagaagctcgatgccatggtcacc
ggcttcgatcgttcgaagaagccgaacttctcggtcaaggcccgccagctggccgaagag
aaggaagccgtggaacagtacggctcgtcggatgccggcgcctcgctgggcgacatcctc
ggcgccgctctgaaggcgaagcagtaa
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