Novosphingobium sp. THN1: C7W88_09480
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Entry
C7W88_09480 CDS
T05635
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_09480
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C7W88_09480
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AXU19215
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Position
1899296..1899727
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AA seq
143 aa
AA seq
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MADVVDQATRSRMMAGIKGANTKPEIALRKAMHALGLRFRLHAKGMPGRPDIVLPRWKAV
ILVHGCFWHRHKGCRYATVPRTRPEFWNQKFAANVNRDQRNLDDLGASGWRTRVIWECEL
NKLGASHIAEDIREWLTMCASGQ
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttgttgatcaagccacccgttcccggatgatggcgggcatcaagggcgcc
aacacgaagcctgaaatagcgctgcgaaaagccatgcacgctttaggactacggttccga
cttcacgcgaagggcatgcctgggcgtcccgatatcgtccttcctcgctggaaggctgtg
attttggtgcatggctgtttctggcatcgccacaaaggttgccgatacgccaccgtccct
cggacacggcctgagttttggaaccagaaatttgccgcaaacgtcaatcgggatcagcgc
aatctagacgacctcggagcttccggatggcgaacccgcgtaatctgggaatgcgaattg
aataagctcggtgcaagtcatattgcggaggacattcgggaatggctgaccatgtgcgcc
tccggtcaatga
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