Novosphingobium sp. THN1: C7W88_11545
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Entry
C7W88_11545 CDS
T05635
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00020
Citrate cycle (TCA cycle)
not00190
Oxidative phosphorylation
not00650
Butanoate metabolism
not00720
Other carbon fixation pathways
not01100
Metabolic pathways
not01110
Biosynthesis of secondary metabolites
not01120
Microbial metabolism in diverse environments
not01200
Carbon metabolism
Module
not_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
not_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C7W88_11545
00650 Butanoate metabolism
C7W88_11545
09102 Energy metabolism
00190 Oxidative phosphorylation
C7W88_11545
00720 Other carbon fixation pathways
C7W88_11545
Enzymes [BR:
not01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
C7W88_11545
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AXU19523
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Position
2336769..2338580
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AA seq
603 aa
AA seq
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MTTQPAYKIIDHTYDTVVVGAGGSGLRATMGSAQAGLRTACITKVFPTRSHTVAAQGGIA
ASLGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNPEGTI
YQRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFAIDLIMEN
GECRGVIALCMDDGSIHRFRSHAVVLATGGYGRSYFTATSAHTCTGDGGGMVLRAGLPLQ
DMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMA
MEIREGRGVGPHKDHIYLHLDHIDAGVLAERLPGITESGKIFAGVDLTRQPLPVVPTVHY
NMGGIPCNYHGEVVTIGADGNPETVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRA
TGLRLKELIKPGTSHNSLPKDSADLALTRLDHFRHAKGGSPTAEVRVEMQRTMSAHAAVF
RTDELMAEGKVKLANTYKRMEDIHVSDRSLIWNSDLVETLELDNLISQASVTMHSAYNRK
ESRGAHAHEDFPDRNDAEWMKHTAAWFNGWGGKGGEVRLDYRPVHEYTLTDDVEYIKPKK
RVY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcagcctgcctacaagatcatcgaccacacctacgacactgtcgtcgtcggt
gccggcggttcgggcctgcgcgccaccatgggttcggcccaggccggcctgcgcaccgcc
tgcatcaccaaggtcttcccgacccgctcgcacaccgtggcggcacagggcggcatcgcc
gcctcgctcggcaacaactcgcccgaccactggacctggcacatgtacgacaccgtcaag
gggtcggactggctgggtgaccaggacgccatcgaatacatggtgcgcgaagctccggct
gcggtctatgaactcgagcacgccggtgtgccgttcagccgcaatcccgaaggcacgatc
taccagcgcccgttcggcggccacatgcagaacatgggcgaaggcccgccggtgcagcgc
acctgcgccgcggctgaccgtaccggccacgccatgcttcacgcgctgtatcagcagtcg
ctgaagtacgacgcggacttcttcatcgaatacttcgcgatcgatctgatcatggagaac
ggtgaatgccgtggcgtgatcgcgctctgcatggacgatggctcgatccaccgcttccgc
agccacgcggtcgtgctggcaaccggcggttacggccgttcgtacttcacggctacctcg
gctcacacctgcaccggtgacggcggcggcatggtcctgcgcgcagggctcccgctgcag
gacatggaattcgtgcagttccacccgaccggcatctacggcgcaggcgtgctgatcact
gaaggcgcacgcggcgagggcggttacctcaccaactccgagggcgagcgcttcatggag
cgctatgcaccctcggccaaggacctcgcctcgcgtgacgtcgtctcgcgttcgatggcc
atggaaatccgcgaaggccgcggcgttggcccgcacaaggaccacatctacctgcacctc
gatcacatcgatgcgggcgtcctggccgagcgtctgccgggcatcaccgaaagcggcaag
atcttcgccggcgtcgacctgacccgccagccgctgccggtggttccgaccgtccactac
aacatgggtggcatcccctgtaactaccacggcgaagtggtcaccatcggtgctgacggc
aaccccgaaacggtagttcccggcctgttcgcggtgggtgaagcggcctgtgtttcggtt
catggcgccaaccgcctcggctcgaactccctgatcgaccttgtcgtgttcggccgcgct
accggcctgcgcctcaaggagctgatcaagccgggcacgtcgcacaactcgctgcccaag
gacagcgcggacctcgcgctgacccgcctcgatcacttccgccatgccaagggcggctcg
cctacggccgaggttcgcgtcgagatgcagcgcacgatgtcggcccacgccgcggtgttc
cgcaccgacgagctgatggccgaaggcaaggtcaagctcgccaacacctacaagcgcatg
gaagacattcacgtgtccgaccgttcgctgatctggaactcggaccttgtcgagacgctc
gagctggacaacctgatcagccaggcttcggtcaccatgcattcggcctacaaccgcaag
gaaagccgcggcgcgcatgcgcacgaggatttccccgatcgcaacgatgccgagtggatg
aagcacaccgcagcctggttcaatggctggggcggcaagggcggcgaggtccgcctcgac
taccgcccggtccacgaatacacgctgaccgacgacgtcgagtacatcaagccgaagaag
cgcgtgtactga
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