Novosphingobium sp. THN1: C7W88_11620
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Entry
C7W88_11620 CDS
T05635
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_11620
Enzymes [BR:
not01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C7W88_11620
DNA repair and recombination proteins [BR:
not03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C7W88_11620
Prokaryotic type
C7W88_11620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXU20660
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Position
2353347..2354726
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AA seq
459 aa
AA seq
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MPSSTQAEPSIVWLRRDLRLADQAALLAAAEAGPVIPVYVLDDETPRHCRMGGASRWWLH
HSLGSLDASLRKRGSRLILRRGKVQEELAAVRRETGARVVHALHHYEPWWRNAEKAVAKA
MQLVLHDGNYLAPAGAVKTGSGAPYKIFTPFWHALKERMPPAHPTEAPQKLEAPEHWPAS
DKLDDWKLLPTKPDWAGGFCEEWTPGEEGARKRLEVFADRAARYDECRNLPSIEGTSRLS
PHLHFGEISPATVWQWVADAGGSVDVFLSELGWRDYAQNVIVQFPEYGSKNAREAYDRLH
WRDDPEGLAAWQQGRTGYPIVDAGMRELWRTGWMHNRVRMIAASFLVKHLLIDWREGERW
FWDTLVDADYGSNAVNWQWTAGTGVDSNMFVRIMAPLTQSPKFDAAGYIRKWVPELRHLS
DAEIHDPTFPPQGYIRKIVPHAEARARALAAHDAMKAHG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgccatcctcgacgcaagccgagccgtcaatcgtctggctcaggcgcgatcttcgtctg
gccgatcaagcggcgttgctggcagccgccgaggccgggccggttatcccggtctacgtg
ctcgatgacgagacgcccaggcactgccgcatgggtggtgcctcgcgctggtggctgcat
cacagccttggcagcctggatgccagcttacgcaagcggggctcgcgactgatcctgcgg
cgaggcaaggtgcaagaggaactggcggctgtgcgccgcgaaaccggggcgcgggtcgtc
catgcgttgcaccactacgagccgtggtggcgcaatgcggagaaggccgtagccaaggcc
atgcaacttgtcctgcacgatgggaactacctcgcccctgctggtgcagtgaagacagga
agcggcgcgccgtacaagatcttcacgccgttctggcacgcgctgaaggagcggatgccg
cctgcccatccgactgaagcgccgcagaagctggaggcgccggagcattggcccgcgagc
gacaaactcgatgattggaagctgctgcccaccaagcctgactgggcaggcgggttttgc
gaggaatggacccccggggaagagggcgcgcgcaaacgtcttgaagtcttcgccgaccgc
gccgcacgctacgacgaatgccgcaatctgccttcgatcgaaggaacgtcacgcctttcc
ccacatctgcactttggcgagatatccccggcgacggtgtggcagtgggtcgccgacgct
ggcggatcggtcgacgtgttcctgagcgagcttggctggcgcgattatgcccagaacgtg
atcgtgcagttcccggaatatggttcgaaaaacgcgcgcgaagcctatgaccggctgcac
tggcgtgacgatcccgaggggctggcagcatggcagcagggccgcaccggctatcccatc
gtcgatgccgggatgcgcgaactgtggcgcaccgggtggatgcacaaccgcgtgcgcatg
atcgcggcgagctttctggtgaagcacctgctgatcgactggcgcgaaggcgagcgctgg
ttctgggacacgttggtcgatgccgactacggttcgaatgcggtcaactggcaatggacc
gcgggcaccggggtagattcgaacatgttcgtgcggatcatggcgccgctcacgcaatcg
ccgaagttcgatgcagccggttacatccgcaagtgggtgcctgaactgcgacatctgtcc
gatgccgagatccacgacccgacgttcccgccgcagggctatatccgcaagatcgtgccg
catgccgaagcgcgggcgcgggctttggcggcacatgatgcaatgaaggcgcatggctga
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