Novosphingobium sp. THN1: C7W88_11920
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Entry
C7W88_11920 CDS
T05635
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00730
Thiamine metabolism
not01100
Metabolic pathways
not01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C7W88_11920
Enzymes [BR:
not01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
C7W88_11920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AXU19573
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Position
2421274..2423157
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AA seq
627 aa
AA seq
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MADINSKLEIGVTTGPIRGSRKIHVESARFPGLTVAMREISLEPSSGEPPVRVYDTSGPY
TDSNVMIDIAAGLPKLRHDWIVGRGDVEAYEGRAVKPEDNGLKGPDRSAGVPPFPNVVKR
PLRAKAGQNVSQMHYARQGIITPEMEYVAIRENLGRKQAKEALIRDGQDWGASIPDYVTP
EFVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSI
RWGADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLI
EQAEQGVDYFTIHAGVRLPYIPLAAKRMTGIVSRGGSIMAKWCLAHHKESFLYENFDEIT
EIMKAYDVAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKRAWAQDVQVMIEGPGHVPM
HKIKENMTKQLEACGEAPFYTLGPLVTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKE
HLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPD
TAEQYHDQTLPAEGAKSAHFCSMCGPKFCSMKISQEVREFAAKQNQPIETFVAADEAEAE
AGMKAMSAKYDEMGRELYIGAGGREHD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcaactccaagctggaaatcggcgtcaccaccgggccgatccgtggcagc
cgcaagatccacgtggaaagcgcgcgctttcccggcctgaccgtggcgatgcgcgagatt
tcgcttgagccttcgagcggggagccgccggtgcgggtctacgacacgtccggtccttat
actgacagcaacgtcatgatcgatattgccgccggcctgcccaagctgcgccacgactgg
atcgtcggtcgcggcgatgtcgaggcctatgagggccgtgcggtcaagcccgaggacaac
ggcctgaagggaccggaccggtcggcaggtgttccgccgttcccgaacgtggtgaagcgg
ccgctgcgggccaaggccgggcagaacgtcagccagatgcactatgcgcggcagggcatc
atcacgcccgagatggaatacgtggcgatccgcgaaaacctcggccgcaagcaggcaaag
gaagcgctgatccgcgacgggcaggattggggcgcctcgatccccgattacgtgacgccg
gagttcgtgcgtgatgaagtggcgcgcgggcgggcgatcatcccttcgaacatcaatcac
cccgaaagcgagccgatggcaatcgggcgcaacttcctcgtcaagatcaacgccaacatc
ggcaactcggcggtcgcgtctgacgtggcgagcgaagtcgacaagatggtctggtcaatc
cgctggggcgcggacaccgtgatggacctttcgaccggccgcaatatccatgacacgcgc
gagtggatcctgcgcaacagcccggtgccgatcggcacggtgccgatctatcaggcgctg
gaaaaggttggcggcatcgccgaggacctgacctgggagatcttccgcgataccctgatc
gagcaggctgaacagggcgtggactacttcacgatccacgccggcgtgcgcctgccctac
atcccgctggccgccaagcgcatgaccggcatcgtcagccgtggtggctcgatcatggcc
aagtggtgcctggcgcatcacaaggaatcgttcctctacgagaacttcgacgagatcacc
gagatcatgaaggcctatgacgtggcctattcactgggcgatggcctccgccccggttcg
atctacgatgccaacgacgaggcgcagttcgccgagctctatacgctgggcgagttgacc
aagcgtgcctgggcgcaggacgtgcaggtgatgatcgaaggccccggccacgtgccgatg
cacaagatcaaggagaacatgaccaagcagctcgaagcatgcggcgaagcgccgttctat
acgctcgggccgctcgtcaccgacatcgcgccgggatacgaccatatcaccagcggcatc
ggcgcggcccagatcggctggtacggcacggcgatgctctgctacgtcacgcccaaggaa
caccttggcctgccggaccgcgacgacgtaaaggtcggcgtggtgacctacaagctggcc
gcccacgcggcggacctcgccaagggccaccccgcggcgcaggtgcgcgacgatgcgctg
agcaaggcgcgcttcgagttccgttggcgtgaccagttcaacctctcgctcgatcccgac
accgcagagcagtatcacgaccagacgcttccggccgagggcgcgaagtctgcacacttc
tgctcgatgtgcgggccgaagttctgctcgatgaagatcagccaggaagtgcgcgaattc
gccgccaagcagaaccagccgatcgaaactttcgtcgcggctgacgaagccgaggcggaa
gccggcatgaaggccatgagcgcgaagtacgacgagatgggccgcgagctttacatcggc
gcgggtgggcgcgagcacgactga
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