Novosphingobium sp. THN1: C7W88_12615
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Entry
C7W88_12615 CDS
T05635
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_12615
Enzymes [BR:
not01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7W88_12615
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C7W88_12615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXU19673
LinkDB
All DBs
Position
2559369..2562341
Genome browser
AA seq
990 aa
AA seq
DB search
MAERSTRPRVWSIAAHRGFADALVAGLIPRYREDRFGLARLTLLLPSQRAIRTVTEAFVR
VSGQGLLLPRLAVVGDLDLDETLGPLLDPIGAGAGVPEAVDPVHRLLKLSALIRDELGAE
APGEAALLRQARSLGQSIDRLLVEGVRPEDMLDEGVLGLSSELSEHWRESTKLFATVFFK
WQDELARLGRIDAPERRNLLLAHAAQVWREAPPAHPVIAAGVTSASPAVANLLRVIADLP
DGGVILPDLDLAMEASVWDALGFAGGSDGKVFERGDVVTHPQYHLKLLLNRMGIGRGEVE
PWHRSGLAPAPPERSRAISNLFLPPEASAAWASLEARERRLSGVRIMESANPEEEAQAIA
VLVREALDEPERRVAVITPDRSLAARVVAHLGRWNIGADDTAGRPLPQTAAGRIILQLAE
VVAERAAPVPLLALLGHPLVRAGEGRAQWLERVRQLDLVLRGPRPGPGLAAVRGKAQEHD
KRHPGLADWWSGVEDLLFPLLSLDGQVSLDAALIALSEVGEALCGQGLWAQADGRCLAQF
VESWREAASEHPGLLPPEELPAVLRDAMEEVSVRPPYGGHPRLAIYGLLEARMSRADLVI
CAGLTEGSWPGSPATDPLLAPPILRALGIPGADFRIGLSAHDLAAALGAPEVVLSHAHRD
ATGPVIPSRFLLRIHAMLGEQLRRETRAVNLARALADPEPELPHPRPHPMPSAEQRRVPI
AVTALDRLRGDPYQFYASAILGLRRLDPVDADPSPAWKGTAVHDVLKAWHDGGGRPGELV
PLAERMFDEMSAHPFMRAMWKPRLIDALLWIEEETDRLAGEGRDVLAIERKGEIIVDGIR
IHGRADRIDRLADGTLAVVDYKTGTPPSGKMVAQGYALQLGLIGMIARGGGMEGVAGEPV
KFEYWSLGRNKDRSFGYMKSPVKETARQTGLLLEDFLPETERFLREAIARWLLGSEPFTA
RLNPDLPGYSDFDQLMRLDEWQGREEEGSQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgctccacccgcccgcgtgtctggtcaatcgcggcgcaccggggttttgcc
gacgccctggttgcgggcctgatcccgcgttaccgcgaggatcggttcggccttgcgcgc
ctgacgctgctgctgccgagccagcgcgcaatccgcacggtaaccgaagctttcgtgcgg
gtcagcgggcagggtctgctgctgccacgcctggcggtggtgggcgacttggatctcgac
gagacgcttgggccactgctcgacccgatcggcgccggagctggggttcccgaagctgtc
gatccggtgcaccggctgctgaaactttcagcgctgatccgagacgagcttggtgccgaa
gcccccggcgaggcggccttgctgcgacaggccagaagcctgggccagagcatcgaccgg
ctgcttgtcgagggtgtgcgtcccgaggacatgcttgatgagggcgtcctcggcctgtcg
tcggaactgtcggagcactggcgggaaagcacgaagctgttcgccacggtgttcttcaag
tggcaggacgaactggcgcggttgggcaggatcgacgcgccggaacggcgcaatctgctg
ctggcgcatgccgcgcaggtatggcgtgaagcgccaccagcccatccggtgattgctgcg
ggcgtcacctcggcatcgccggccgtcgccaacctgctgcgggtgattgcggatctgccg
gatggcggcgtcatcctgcccgatctcgatcttgccatggaggcttcggtctgggacgcg
ctcgggtttgccggcgggtcagacggcaaggtgtttgagcgaggggatgtcgtcacgcat
ccccaatatcacctgaagctgctgctgaaccgcatgggcatcggacggggcgaggtcgag
ccgtggcaccgctccggccttgctccagcgccgccggaacgcagccgcgccatctcgaac
ctgttcctgccgccggaagccagtgcggcgtgggcttcgctcgaagcgagggagcgccgc
ctttccggcgtgcgcatcatggagagcgccaaccccgaggaggaagcgcaggcgattgcc
gtgctggtccgcgaagcgcttgacgagccggagcgccgcgtggcggtgatcacgcccgat
cgcagtctggcggcgcgggtcgtggcgcatcttggccgctggaacattggcgcggacgat
acggccggtcggccattgccgcagacggcggccggcaggatcatcctgcaactggccgaa
gtcgttgccgagcgggccgcgccggttccgctgctcgccctgctcggccacccgctggtt
cgggcaggcgagggcagggcgcagtggctcgagcgggtgcgacagctggacctggtgctg
cgtggtccgcgacccggccccggactggccgccgtgcggggcaaggcgcaggagcatgac
aagcgccatcccgggcttgccgactggtggtcgggtgtcgaggacctgctgtttccgctg
ctgtcgcttgatggccaggtgtcactggatgcggcactgatcgcgctgtccgaagtgggc
gaggcgctgtgcggacaggggctgtgggcgcaggccgatgggcgctgccttgcccagttc
gtcgaaagctggcgcgaagctgcttcggagcatccgggcctgctgccgccggaagaactg
ccggcagtgttgcgcgatgccatggaggaagtctccgtgcgtccgccctacggcgggcat
ccgcgtctggcgatctacggcttgctcgaagcgcggatgagccgggccgatctcgtcatc
tgcgcaggcctgacagaaggctcctggcccggaagcccggcgactgatccgctgctggca
ccgcccattctccgcgcattgggcatccccggtgccgatttccgcatcggcctttctgca
cacgatcttgccgctgcactgggagcgccagaggttgtgctcagccatgcgcaccgcgac
gcgaccggcccggtcattccttcgcgcttcctgctgcgcattcacgccatgcttggcgag
cagttgcggcgcgagacgcgcgcggtcaacctggcgcgggcgctggccgacccggaaccg
gagctgccacacccacgcccacacccgatgccgagcgcggagcagcggcgcgtgccgatt
gcggtaacggcgctggatcggctgcgcggcgatccgtaccagttctacgcctcggcaatc
cttggcctgcgtcgcctcgatccggtcgatgccgatccgtcgccagcctggaaaggcact
gcggttcacgacgtgctgaaagcctggcacgatggcggcgggcgtcccggcgaattggtg
ccgcttgccgaacgcatgttcgacgagatgagcgcacaccccttcatgcgcgcgatgtgg
aagccgcgcctgatcgatgccttgctgtggatcgaggaggaaacggaccggcttgccggg
gaggggcgcgacgttctggcgatcgagcgcaagggcgaaatcatcgtcgacggcatccgc
attcatggccgggccgaccgtatcgacaggctggccgacggaacgctggccgtagtcgat
tacaagaccggcacgccgccatcgggcaagatggtggcgcaagggtacgcccttcagctt
ggcctcatcggcatgattgcccggggtggcggcatggagggcgtcgcgggcgagccggtg
aagttcgagtactggtcgcttggccgcaacaaggatcgcagctttggctacatgaagtcg
ccggtcaaggaaacggcgcggcagaccggcctgttgcttgaagacttcttgcccgaaacc
gagcgtttcctgcgtgaagcgattgcgcgctggctgcttggcagcgagccattcacggcg
cggctcaatcccgatctcccgggatacagtgatttcgaccagttgatgcgcctcgacgaa
tggcaaggccgcgaagaggaaggcagtcagtga
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