Novosphingobium sp. THN1: C7W88_13030
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Entry
C7W88_13030 CDS
T05635
Name
(GenBank) hypothetical protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
not
Novosphingobium sp. THN1
Pathway
not03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C7W88_13030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_13030
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C7W88_13030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
MgpC
Nab2p_Zf1
Motif
Other DBs
NCBI-ProteinID:
AXU19745
LinkDB
All DBs
Position
2636843..2637538
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AA seq
231 aa
AA seq
DB search
MTMIRVIDFETSGTEPPAGKVCEVGICDLDLTTRKVLLPRSWLCGVDAMPPDVRAVHHIS
LSECADRPPFDPADMFSEGLGAIAAHNAEFETKFFDSPVPVICTYKAALRVWPDAPSHSN
GALRYWLEDAGKIAPDHALTQPAHRAGPDAYVTAHILLALFDAGATGRDMVQWTKEPRLL
PTCPLGKFRGVPWSEVEAGFLGWMLRQPTMEEDLKWNAQREITRRQKGAGL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatccgcgtcatcgacttcgaaacgtcgggcacggaaccgcccgccggcaag
gtgtgcgaagtcggcatctgcgatctggacctgacaacacgcaaggttctgctgccgcgc
tcgtggctctgcggtgtcgatgcaatgccgccggacgtccgcgcagtgcatcacatcagc
ctcagcgaatgcgctgatcgtccgccgttcgatcctgctgacatgttcagcgaaggtctt
ggtgcgatcgctgctcacaacgccgaattcgagaccaagttctttgacagcccggtgccg
gtgatctgcacttacaaggcagcgctgcgcgtctggcccgatgcgccaagccattcaaac
ggcgcactccggtactggctcgaagatgcgggcaagatcgcaccggatcatgccctgacg
cagcccgctcatcgcgccgggcccgacgcctacgtcaccgctcacatccttctcgcgctc
ttcgatgcgggagcgacgggcagggacatggtgcagtggacaaaggaaccgcgccttctg
ccgacatgcccgctgggcaagttccgcggcgtgccctggtcagaagtcgaagccggtttc
ctcggatggatgctgcgtcagccgacgatggaagaagacctcaagtggaatgcgcagcgc
gagatcacgcgccgccagaaaggagcaggactgtga
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