Novosphingobium sp. THN1: C7W88_13225
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Entry
C7W88_13225 CDS
T05635
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_13225
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C7W88_13225
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA
DnaB_C
RecA
AAA_16
AAA_22
Lon_C
AAA_30
MCM
nSTAND3
AAA_24
DUF7125
AAA_5
NACHT
Zeta_toxin
NTPase_1
Rad51
AAA_14
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AXU19775
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Position
2665413..2666780
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AA seq
455 aa
AA seq
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MAKPKRRFVCQACGSVTTRWQGQCVDCSEWNTLTEEAPETIFSAKHDLSSGGRRVAFVPL
DAPVALPVRRSTGIAEFDRALGGGLVPGCAVLMGGDPGIGKSTLLLQAAAKIAMAGGEAV
YISGEEASDQVRLRADRLGLGKAPIQLASATSVRDILTTLGSMNPPSLLVIDSIQTMHSD
QIEGAPGTVSQVRGCAFELIRYAKETGVSLMLVGHVTKDGSIAGPRVLEHMVDVVMSFEG
ERSHQYRILRAIKNRFGAVDEIGVFAMAGAGLEEVGNPSMLFLSGREDQVAGSAVFPALE
GTRPVLVEIQALTVRLASGATPRRAVVGWDSGRLAMLLAVLEARCGLSFSTAEVYLNVAG
GYRLTDPAADLAVAAALISALSDRPLPAASIWFGEVSLAGEVRPVAHTPVRLREAAKLGF
SLGCGPEAGAEKVDGLRYSPLKLLPNLIDRIMGGS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacccaaacgtcgcttcgtctgccaggcctgtggcagcgtcaccacccgctgg
caggggcaatgtgttgattgcagcgaatggaatacgctgacggaagaagcgccggaaacg
atcttctcggccaagcatgacttgtcgagcgggggacgccgcgttgcgttcgttccgctt
gatgcgcccgtcgcgcttcccgtgcggcgatccactggcattgccgagttcgaccgggcg
ctgggcggcgggctcgttcccggttgtgctgtgctgatgggtggtgatcccggcatcggc
aagtcgaccttgctcctccaggcggcggcgaagatcgcgatggcaggcggcgaggctgtc
tacatcagcggcgaagaagcgtcggaccaggttcgcctgcgggctgaccgcctcggcctc
ggcaaagcgccaatccagctggcttcggcgacgtccgtgcgagatatcctgaccacgctt
ggctcgatgaacccgccatcgctgctggtgatcgattcgatccagacgatgcattccgac
cagatcgaaggtgcgcccgggacggtcagccaggtccgcggctgcgcgttcgaacttatc
cgttatgccaaggaaaccggcgtctcgctgatgctggtcggccacgtgaccaaggatggc
tcgatcgccggcccccgcgtgctcgaacatatggtcgatgtggtcatgagcttcgaaggg
gagcgcagccaccagtaccgcatccttcgcgcgatcaagaaccgcttcggcgccgtggac
gagatcggcgtcttcgccatggccggggcagggctcgaagaagttggcaatccctcgatg
ctgttcctttcggggcgcgaggatcaggttgctggcagcgccgtgttcccggccctcgaa
ggcaccaggcccgttctggtcgaaattcaggcgctgacagtcaggctggcgagcggggcc
actccgcggcgtgccgtggtcgggtgggacagcggccgacttgccatgttgctggcggtg
ctcgaggctcggtgcgggctcagtttctccacggcggaagtctatctcaatgtcgccggc
ggttaccgcctgaccgacccggccgccgatcttgccgtagccgcagccctgatctcggcc
ttgtcggaccgtccgctgcctgccgcttcgatctggttcggggaagtctcgctagctggt
gaagtccgaccggtggctcacacgcccgtccgcctgcgcgaagcggccaaactgggtttc
agcctcggctgcggacccgaagctggcgccgaaaaggttgacggcctgcgctactctccg
ctcaaactgctgccaaatctcattgaccgcataatgggcggctcatag
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