KEGG   Novosphingobium sp. THN1: C7W88_13285
Entry
C7W88_13285       CDS       T05635                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
not  Novosphingobium sp. THN1
Pathway
not00010  Glycolysis / Gluconeogenesis
not00020  Citrate cycle (TCA cycle)
not00260  Glycine, serine and threonine metabolism
not00280  Valine, leucine and isoleucine degradation
not00310  Lysine degradation
not00380  Tryptophan metabolism
not00620  Pyruvate metabolism
not00630  Glyoxylate and dicarboxylate metabolism
not00640  Propanoate metabolism
not00670  One carbon pool by folate
not00785  Lipoic acid metabolism
not01100  Metabolic pathways
not01110  Biosynthesis of secondary metabolites
not01120  Microbial metabolism in diverse environments
not01200  Carbon metabolism
not01210  2-Oxocarboxylic acid metabolism
not01240  Biosynthesis of cofactors
Module
not_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
not_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:not00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    C7W88_13285 (lpdA)
   00020 Citrate cycle (TCA cycle)
    C7W88_13285 (lpdA)
   00620 Pyruvate metabolism
    C7W88_13285 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    C7W88_13285 (lpdA)
   00640 Propanoate metabolism
    C7W88_13285 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C7W88_13285 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    C7W88_13285 (lpdA)
   00310 Lysine degradation
    C7W88_13285 (lpdA)
   00380 Tryptophan metabolism
    C7W88_13285 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    C7W88_13285 (lpdA)
   00670 One carbon pool by folate
    C7W88_13285 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:not04147]
    C7W88_13285 (lpdA)
Enzymes [BR:not01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     C7W88_13285 (lpdA)
Exosome [BR:not04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   C7W88_13285 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 GIDA NAD_binding_8 HI0933_like FAD_binding_3 DAO Lys_Orn_oxgnase Thi4 2-Hacid_dh_C AlaDh_PNT_C DUF6100 Lycopene_cycl UDPG_MGDP_dh_N 3HCDH_N
Other DBs
NCBI-ProteinID: AXU19782
LinkDB
Position
2678859..2680271
AA seq 470 aa
MADQYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEVL
NHMKHAAAYGLAADNIRADLDAVVKRSRGVAKQLNQGVTHLMKKNKITVHMGNGVLKSAT
SVEVTGEKGTEVISAKHVIVATGARARDLPFAKADGERVWTYRHAMTPKQMPTKLLVIGS
GAIGIEFASFYNDMGAEVTVVEMMDRVVPVEDADVSAFLEKALTKQGMKIMTGAGVESLA
VSGSGVKAKIKGKDGKVAEADYSHVIVAVGIVPNTENIGLETVGVKAERGIIAIDGYGRT
NVKGLWAIGDVTPGPWLAHKASHEGVIAAEAIAAELGNKDVHPHPMDRANIPGCTYCHPQ
IASVGLTEAKAKEAGYELKVGTFPFIGNGKAIALGEPEGFVKTVFDAKTGELLGAHMIGA
EVTEMIQGYVVGKTLETTEAELMHTVFPHPTISESMHESVLAAYGRAIHI
NT seq 1413 nt   +upstreamnt  +downstreamnt
gtggctgaccaatacgacgtcatcgtcctcggatcgggccccggcggctatgtcgcggcg
atccgctgcgcgcagcttggcctgaagaccgccattgtcgaacgcgagaacctcggcggc
atctgccttaactgggggtgcatcccgaccaaggcgctgctgcgttcggccgaagtgctc
aatcacatgaagcacgccgctgcctatggtctcgctgccgacaatattcgcgccgatctc
gatgcggtggtcaagcgctcgcgcggcgtggccaagcagctcaatcagggcgtgacgcac
ctgatgaagaagaacaagatcaccgtgcacatgggcaatggtgtcctgaagtcggcaacc
tcggtcgaggttaccggtgagaagggcacggaagtaatctcggccaagcatgtgatcgtc
gccaccggcgcccgcgcgcgcgatttgccgttcgccaaggccgatggcgagcgggtgtgg
acttatcgccacgctatgacgcccaagcagatgccgaccaagctgctggtcatcgggtcg
ggcgccattggcatcgaatttgccagcttctacaatgacatgggtgccgaagttacggtc
gtcgagatgatggaccgcgtggttcccgtggaagatgctgacgtttcggccttcctcgaa
aaggcgctgaccaagcagggcatgaagatcatgaccggcgcgggcgtcgagagccttgcc
gtctcaggatcgggcgtgaaggcgaagatcaagggcaaggacggcaaggttgccgaggcc
gactacagccatgtcatcgtcgccgtcggcatcgtgccgaacaccgagaacatcgggctt
gagaccgtgggcgtgaaggccgaacgcggcatcatcgccatcgacggctatggccgcacc
aatgtgaagggcctctgggccatcggcgatgtcacgccgggtccatggctggcgcacaag
gcgagccacgaaggcgtgatcgccgccgaagccattgccgccgaactcggcaacaaggac
gtccatccccatccgatggaccgcgccaacattccgggctgcacctactgccacccccag
atcgccagcgtcggcctgaccgaagcgaaagccaaggaagccggttacgaactgaaggtc
gggactttcccgttcatcggcaacggcaaggccatcgcgctgggtgagccggaaggcttc
gtgaagaccgtgttcgacgccaagaccggcgaacttctgggcgcccacatgatcggcgcg
gaagtgaccgagatgatccagggctacgtcgtcggcaagacgctcgagacgaccgaagcc
gaactgatgcacaccgtcttcccgcacccgacgatcagcgaatcgatgcacgaaagcgtc
ctcgctgcatacgggcgcgcgatccacatctga

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