Novosphingobium sp. THN1: C7W88_13285
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Entry
C7W88_13285 CDS
T05635
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00010
Glycolysis / Gluconeogenesis
not00020
Citrate cycle (TCA cycle)
not00260
Glycine, serine and threonine metabolism
not00280
Valine, leucine and isoleucine degradation
not00310
Lysine degradation
not00380
Tryptophan metabolism
not00620
Pyruvate metabolism
not00630
Glyoxylate and dicarboxylate metabolism
not00640
Propanoate metabolism
not00670
One carbon pool by folate
not00785
Lipoic acid metabolism
not01100
Metabolic pathways
not01110
Biosynthesis of secondary metabolites
not01120
Microbial metabolism in diverse environments
not01200
Carbon metabolism
not01210
2-Oxocarboxylic acid metabolism
not01240
Biosynthesis of cofactors
Module
not_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
not_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C7W88_13285 (lpdA)
00020 Citrate cycle (TCA cycle)
C7W88_13285 (lpdA)
00620 Pyruvate metabolism
C7W88_13285 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
C7W88_13285 (lpdA)
00640 Propanoate metabolism
C7W88_13285 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C7W88_13285 (lpdA)
00280 Valine, leucine and isoleucine degradation
C7W88_13285 (lpdA)
00310 Lysine degradation
C7W88_13285 (lpdA)
00380 Tryptophan metabolism
C7W88_13285 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C7W88_13285 (lpdA)
00670 One carbon pool by folate
C7W88_13285 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
not04147
]
C7W88_13285 (lpdA)
Enzymes [BR:
not01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
C7W88_13285 (lpdA)
Exosome [BR:
not04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
C7W88_13285 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
HI0933_like
FAD_binding_3
DAO
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
AlaDh_PNT_C
DUF6100
Lycopene_cycl
UDPG_MGDP_dh_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AXU19782
LinkDB
All DBs
Position
2678859..2680271
Genome browser
AA seq
470 aa
AA seq
DB search
MADQYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEVL
NHMKHAAAYGLAADNIRADLDAVVKRSRGVAKQLNQGVTHLMKKNKITVHMGNGVLKSAT
SVEVTGEKGTEVISAKHVIVATGARARDLPFAKADGERVWTYRHAMTPKQMPTKLLVIGS
GAIGIEFASFYNDMGAEVTVVEMMDRVVPVEDADVSAFLEKALTKQGMKIMTGAGVESLA
VSGSGVKAKIKGKDGKVAEADYSHVIVAVGIVPNTENIGLETVGVKAERGIIAIDGYGRT
NVKGLWAIGDVTPGPWLAHKASHEGVIAAEAIAAELGNKDVHPHPMDRANIPGCTYCHPQ
IASVGLTEAKAKEAGYELKVGTFPFIGNGKAIALGEPEGFVKTVFDAKTGELLGAHMIGA
EVTEMIQGYVVGKTLETTEAELMHTVFPHPTISESMHESVLAAYGRAIHI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccaatacgacgtcatcgtcctcggatcgggccccggcggctatgtcgcggcg
atccgctgcgcgcagcttggcctgaagaccgccattgtcgaacgcgagaacctcggcggc
atctgccttaactgggggtgcatcccgaccaaggcgctgctgcgttcggccgaagtgctc
aatcacatgaagcacgccgctgcctatggtctcgctgccgacaatattcgcgccgatctc
gatgcggtggtcaagcgctcgcgcggcgtggccaagcagctcaatcagggcgtgacgcac
ctgatgaagaagaacaagatcaccgtgcacatgggcaatggtgtcctgaagtcggcaacc
tcggtcgaggttaccggtgagaagggcacggaagtaatctcggccaagcatgtgatcgtc
gccaccggcgcccgcgcgcgcgatttgccgttcgccaaggccgatggcgagcgggtgtgg
acttatcgccacgctatgacgcccaagcagatgccgaccaagctgctggtcatcgggtcg
ggcgccattggcatcgaatttgccagcttctacaatgacatgggtgccgaagttacggtc
gtcgagatgatggaccgcgtggttcccgtggaagatgctgacgtttcggccttcctcgaa
aaggcgctgaccaagcagggcatgaagatcatgaccggcgcgggcgtcgagagccttgcc
gtctcaggatcgggcgtgaaggcgaagatcaagggcaaggacggcaaggttgccgaggcc
gactacagccatgtcatcgtcgccgtcggcatcgtgccgaacaccgagaacatcgggctt
gagaccgtgggcgtgaaggccgaacgcggcatcatcgccatcgacggctatggccgcacc
aatgtgaagggcctctgggccatcggcgatgtcacgccgggtccatggctggcgcacaag
gcgagccacgaaggcgtgatcgccgccgaagccattgccgccgaactcggcaacaaggac
gtccatccccatccgatggaccgcgccaacattccgggctgcacctactgccacccccag
atcgccagcgtcggcctgaccgaagcgaaagccaaggaagccggttacgaactgaaggtc
gggactttcccgttcatcggcaacggcaaggccatcgcgctgggtgagccggaaggcttc
gtgaagaccgtgttcgacgccaagaccggcgaacttctgggcgcccacatgatcggcgcg
gaagtgaccgagatgatccagggctacgtcgtcggcaagacgctcgagacgaccgaagcc
gaactgatgcacaccgtcttcccgcacccgacgatcagcgaatcgatgcacgaaagcgtc
ctcgctgcatacgggcgcgcgatccacatctga
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