Novosphingobium sp. THN1: C7W88_13315
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Entry
C7W88_13315 CDS
T05635
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00550
Peptidoglycan biosynthesis
not01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C7W88_13315
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
not01002
]
C7W88_13315
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
not01011
]
C7W88_13315
Enzymes [BR:
not01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C7W88_13315
Peptidases and inhibitors [BR:
not01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
C7W88_13315
Peptidoglycan biosynthesis and degradation proteins [BR:
not01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C7W88_13315
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AXU19787
LinkDB
All DBs
Position
2683569..2684642
Genome browser
AA seq
357 aa
AA seq
DB search
MPRIDAPIALMLDVGSGRVLYARDPHRRFVPASITKIMTSYVAFDLISKGKLRLDQRIPI
RPETFRKWRNVGSTMFLPAEAQPTVAELIEGIVTVSANDACVVLAEGATGSVPAFTALMN
AAAAELGMRDSHFNTPNGWMDEGETYVTAADLATLSGALMTRFPDLYRRFYGHSEMTWNG
ITQPNHNPLYGHTEGADGVKTGFTNEAGYGFVGSAQRHGRRLVMVLGGYDRPIDRTNQSR
AFIEWGFAAWDAKALYRRGANVGTAVVQGGEAREVTLVAPHDLSLTMPKGTTSNYTLSVR
YKGPLKAPIRKGETVASLLVRVPGEAVHVLPLVAGSDVPRGGVLARLRNGALGLVGL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggatcgatgcgccgatcgccctgatgctcgatgtcggttctggccgcgtgctc
tatgcccgtgatccgcaccggcgcttcgtgccggcatcgatcaccaagatcatgaccagc
tatgtcgctttcgatctgatttcgaagggcaaactgcgtctcgaccagcgcattccgatc
cgcccggaaacattccgcaagtggcgcaacgttggcagcacgatgttcctgcccgccgag
gcacagccgaccgttgccgaactgatcgagggcatcgttacggtctcggccaatgatgcc
tgtgtcgtcctggcagaaggcgcgacgggatcggtcccggcatttacagcgctgatgaac
gcagccgcagccgaacttggcatgcgcgacagccacttcaacacccccaatggctggatg
gacgaaggcgagacttatgtgaccgccgccgatcttgccaccctgagcggcgcgttgatg
acgcggtttcccgatctctatcgtcgcttctacggtcactcggagatgacctggaacggg
atcacgcagcccaaccacaatcctctctacggccacaccgaaggggcggacggggtcaag
accggtttcaccaacgaggcgggctatggcttcgttggttccgcgcagcgccacgggcgc
cgtctggtgatggtgcttggagggtatgaccgtccgattgaccgcaccaaccaatcgcgc
gccttcatcgaatggggctttgcagcgtgggacgccaaggcgctctatcgccgcggcgcc
aatgttggcacggcggtggtccagggcggggaggcacgagaggtcacgctggtcgccccg
cacgatctcagcctgaccatgcccaaggggaccacgagtaactacacgctctcggtgcgc
tacaaggggcctctgaaggctccgatccgcaaaggcgagactgtcgccagcctgctggtg
cgcgtaccgggcgaggcggtgcacgtgctgccgcttgttgccggatcggatgtgccacgc
ggcggcgtgctggcgcggctgcgtaatggtgcgctgggactggttgggctgtga
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