Novosphingobium sp. THN1: C7W88_13420
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Entry
C7W88_13420 CDS
T05635
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
not03032
]
C7W88_13420
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_13420
Enzymes [BR:
not01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C7W88_13420
DNA replication proteins [BR:
not03032
]
Prokaryotic type
DNA Topoisomerases
C7W88_13420
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7W88_13420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AXU19804
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Position
2705982..2708738
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AA seq
918 aa
AA seq
DB search
MSDDTTIIDPPVPAPEGEFQRIDIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRIL
WTSHENGFVSTKAYRKSARIVGDCMGKYHPHGDAAIYDALARMTQDWSMRLPLIDGQGNF
GSMDPDPPASMRYTEARLAKVADSLLGDIEKDTVDFIPNYDGSEHEPQVLPARFPNLLVN
GAGGIAVGMATNIPPHNLGEVIDGCLAYMDNPLISIDELIQIIPGPDFPTAPLILGTAGA
RKAYHEGRGSIIMRARHQIEEGRGDRRSIVLTSIPYQVGKSGLVEKIAEAAKDKRIEGIS
DIRDESNREGVRVVIDLKRDATPEVVLNQIWRNTPAQSSFPANMLAIRGGRPEVLNLKDI
IEAFVRFREEVITRRTKFELNKARDRAHILLGLVIAVTNLDEVVRIIRGSPNPATARETL
LAREWPMGEIAPYIKLVEAIEDAGVADAATYRLSEIQVRAILDLRLHRLTALGRDEIGEE
LEGLATAIAEYLSILADRVKLYGVMRQELLEVRQAFATPRRSELTAPADGIEDEDLIERE
DMVVTITLDGYIKRTPLSTFRAQNRGGKGRSGMATKDEDAVATMFVTSTHTPVLFFSTAG
KVYRLKVWRLPEGGPTTRGRPVINMLPALDKDETIATVLPLPEDEAEWGKLSVVFATAKG
NVRRNSMDAFANIPSNGKFAMKFEEDSEDRLIGVALLEASDDVLLATRSGKAIRFAGDEV
REFTSRTSTGVRGMTLKGDDEVISLSILHRVGTTPDEREDYVRFAPWKGEKEGEPALSAE
RYAELQAREQFILTVCANGYGKMSSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPASQA
DQLMLVTDQAKLIRLPLDSLRVIGRGSAGVRLFNVSGDEHVVSAVRLAEGEGDDAEATEA
SNGNESAAPAAPEGGTAE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacaccacgatcatcgaccccccagtccccgccccggaaggcgagttccag
cggatcgacatcgtcgacgaaatgaagaccagctatctcgattacgcgatgagcgtgatc
gtcagtcgcgcgctgccagatgtgcgcgacggcttgaagccggtccatcgtcgcatcctg
tggaccagccatgaaaacggcttcgtctcgaccaaggcctatcgcaagtccgcccgtatc
gtcggcgattgcatgggcaagtatcacccccacggtgacgccgcgatctacgacgccctt
gcgcgcatgacgcaggactggtcgatgcgcctgccgctgatcgacggtcagggcaacttc
ggctcgatggaccccgatccgccggcctcgatgcgctacaccgaagcgcgccttgccaag
gtcgcggattcgctgctcggcgatatcgagaaggacaccgtcgacttcatcccgaactac
gatggttcggagcatgaaccgcaggtcctgcccgcgcgcttccccaacctgctggtcaac
ggcgcaggcggcattgccgtcggcatggccacgaacattccgccgcacaacctcggcgaa
gtgatcgacggctgccttgcctacatggacaacccgctgatctcgatcgacgagctgatc
cagatcatccccggccccgatttccccactgccccgctgatcctcggcactgctggcgcc
cgcaaggcctaccacgaaggccgcggctcgatcatcatgcgcgcccgccaccagatcgag
gaaggccgcggagaccgccgctccatcgtcctcacctcgattccctatcaggtcggcaag
tccggccttgtcgaaaagatcgccgaagccgccaaggacaagcggatcgagggcatctcc
gacattcgcgacgaatccaaccgcgaaggcgtgcgcgtcgtcatcgatctcaagcgcgat
gccacgcccgaagtcgtcctcaaccagatctggcgcaacacccctgcgcagtcgagcttc
ccggccaacatgctcgccatccgtggcggccgtccggaagtgctcaacctcaaggacatc
atcgaggccttcgtccgcttccgcgaggaggtcatcacccgccgcaccaagttcgaactg
aacaaggcgcgtgaccgggcgcatatcctgctcggcctcgtcattgccgtcaccaacctc
gatgaagtcgtgcgcatcatccgcggctcgcccaaccccgccaccgcgcgcgagaccctg
ctcgcccgcgaatggccgatgggtgagatcgcgccctacatcaagctggtcgaggcaatc
gaggacgctggcgtcgccgatgccgccacttatcgcctgtccgaaatccaggttcgcgcc
atcctcgacctgcgcctccaccgcctcaccgcgctgggccgtgacgagatcggcgaggag
ctcgaaggcctcgccaccgccatcgccgaatacctctcgatcctggcagaccgcgtgaag
ctctacggcgtcatgcgccaggaactgctcgaagtccgccaggccttcgccacgccgcgc
cgctcggaattgaccgcgcctgccgacgggatcgaggacgaggacctgatcgagcgcgag
gacatggtcgtcaccatcaccctcgacggctatatcaagcgcaccccgctctccaccttc
cgcgcccagaaccgtggcggcaagggccgctccggcatggccacgaaggacgaggatgcc
gtggcgacgatgttcgtcaccagcactcatacgccggtgctgttcttctcgaccgcaggg
aaggtctatcgcctcaaggtctggcgtcttcctgaaggcgggccgaccacgcgcggccgt
ccggtcatcaacatgctcccggcgctcgacaaggacgagaccatcgccaccgtgctgccc
ctgcccgaggacgaggcagaatggggcaagctctcggtcgtcttcgccacggcgaagggc
aacgtccgccgcaactcgatggacgctttcgccaacatcccgtcgaacggcaagttcgcg
atgaagttcgaagaggacagcgaagaccgcctgatcggcgtcgccctgctcgaagccagc
gacgacgtgctgctcgccacccgttcgggcaaggcgattcgctttgccggcgacgaagtg
cgcgaattcaccagccgcacctcgaccggtgttcgcggcatgacgctcaagggcgacgac
gaagtcatctcgctctcgatcctgcaccgcgtcggcaccacgcctgacgagcgcgaggac
tacgtccgcttcgcaccctggaagggcgagaaggaaggcgaaccggccctgtcggccgag
cgttacgccgaacttcaggcacgcgagcagttcatcctcaccgtctgtgccaacggctat
ggcaagatgtcctcggcctacgagtaccgccgcaccggccgtggtggccagggcatcacc
aatatcgacaacattggccgcaacggcccggtcgtcgccagcttcccggccagccaggcc
gaccagctcatgctcgtgaccgatcaggccaagctcatccgcctgccgctcgattccctg
cgcgtgatcggccgtggctcggcgggcgtgcgcctgttcaacgtctcgggtgacgagcac
gttgtcagtgctgtccgccttgccgagggcgaaggcgacgatgccgaggcgaccgaggcc
agcaacggcaatgaaagcgcagcacccgcggcaccggaaggcggcactgccgaatga
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