Novosphingobium sp. THN1: C7W88_14665
Help
Entry
C7W88_14665 CDS
T05635
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00300
Lysine biosynthesis
not00470
D-Amino acid metabolism
not01100
Metabolic pathways
not01110
Biosynthesis of secondary metabolites
not01120
Microbial metabolism in diverse environments
not01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C7W88_14665
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C7W88_14665
Enzymes [BR:
not01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C7W88_14665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXU19997
LinkDB
All DBs
Position
complement(2961162..2962388)
Genome browser
AA seq
408 aa
AA seq
DB search
MKPLGPIPSGYTSVDGVLAVAGRKVTELVAEAGTTPLFVYSHELLTARVAALRAAMPDRL
SIHYAVKANPYGPLLKHMLGLVDGFDIASGGELAIVREAGIDPALVSFAGPGKRDAELEA
AILAGVTLNLESEGEASRALAIAERLGLRPRLAIRVNPDFDLKGSGMKMGGGAKPFGIDA
ARVPALARKLIAAGADWQGFHIFAGSQALSADAIIETQGQTLALAARLAEETGVTLPKCN
LGGGFGIPYFPGDEPVDINAVGAALAERFADLPEVLRDTAFCIELGRYLVGEAGVYLATV
VDRKESHGEIYLVTDGGLHHQLAASGNFGTVVRRNYPSAIATRFDAAADEEASIVGCLCT
PLDRLADKGGFPRADVGDIVAIFCAGAYGASASPAMFLGQGPAAEMLV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcttggccccattccttcgggttacacctctgtcgacggggtgctggcagtc
gccgggcgcaaggtgacagagctcgtcgccgaagcaggcacgacgcctctgttcgtgtat
tcgcacgagctgttgacggcgcgggttgcggcattgcgcgcagcgatgccggaccgcctt
tccattcattatgctgtcaaagcaaatccttacggacctttgctaaagcatatgctcggg
ttggtcgacggcttcgacattgcatcgggcggcgaactcgcaatcgtccgggaggcgggg
atcgacccggcgctggtcagctttgccggaccgggaaagcgtgacgcggagcttgaagcc
gctatcttggcaggggtgacgctgaacctcgaatccgagggtgaggcgagccgcgcgctg
gccattgctgagcggttgggccttcgtccgcggcttgccattcgggtcaatccggatttc
gacctcaaagggtcgggcatgaagatgggcggcggggccaagccgtttggcatagatgcg
gcccgagtaccggcgctcgcacgcaagctgatcgctgcgggggcggactggcaaggcttt
cacatctttgccggaagtcaggcgctttcggccgatgcgatcatcgaaacgcagggtcag
accctggcactcgccgcgcgcctggccgaggaaaccggggtgacgctgccgaagtgcaat
ctcggcggcggttttggcattccctattttccgggggatgagccggttgatatcaacgcg
gtcggcgccgccttggccgagcgctttgccgatctgccggaggttctgcgcgacacggca
ttctgcatcgagctcggtcgctatcttgttggcgaagcgggcgtttacctggcgaccgtg
gttgatcgcaaggagagccatggcgagatttacctcgtcaccgatggcggcctgcaccat
caactcgccgcctcgggcaacttcggcacggtggtcaggcgcaattatcccagtgccatc
gccacgcgcttcgatgctgcggcggatgaggaggcgagcatcgtcggatgcctgtgcacg
ccgctcgaccggctggccgacaagggcggttttccgcgggctgacgtcggcgatattgtc
gccatattctgcgccggtgcttatggcgcgagcgccagcccggcgatgttcctgggccag
ggtccggctgcggaaatgcttgtctga
DBGET
integrated database retrieval system
