Novosphingobium sp. THN1: C7W88_15050
Help
Entry
C7W88_15050 CDS
T05635
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
not03000
]
C7W88_15050
Transcription factors [BR:
not03000
]
Prokaryotic type
Helix-turn-helix
IclR family
C7W88_15050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_27
Dimerisation
DUF742
GNAT-phage-like
Motif
Other DBs
NCBI-ProteinID:
AXU20062
LinkDB
All DBs
Position
complement(3058545..3059288)
Genome browser
AA seq
247 aa
AA seq
DB search
MNAPAASNPVKSAMRTLDVIEYVVANRQGAVAQEIAGTLAIPVSSLSYLLATLTERGYLT
REGRRYLPGPGLQRLRAPDAALTLEDRVAPLVRALRSELNETSSFMVRRGWEVEALVTEA
SDQALRYAVDPGTRRPLHALAAGKIMAAWLPPAEMERYFAETERAKLTPQTRTTEAELRA
DFAQIMATGFSLAQEEATVGICGMAVPVWIDEQLAGAFSVAVPAVRFDEQLAERVRQLLL
RLAGAVK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccctgccgcctcgaacccagtgaagtcggcgatgcgcacgctcgacgtgatc
gagtacgtcgtcgcaaaccgccagggcgctgtggcgcaggagatcgcgggcacgctggcc
attccggtcagcagcctgtcctatctgctcgccaccttgaccgagcgtggctacctgacg
cgggaagggcggcgctatttgccggggccggggctgcagcggttgcgcgcgccagacgct
gcgctcacgctcgaggatcgcgtggccccgctggtgcgggccttgcgcagcgaactcaac
gagacctcctcgttcatggtccgccgtggctgggaagtggaggcgctggtcaccgaggcc
agcgaccaagcgctgcgctatgccgtcgatcccggcacgcgccgtcctctccatgcgctg
gcggctggcaagatcatggcggcgtggctgccgccggccgagatggagcgctatttcgcc
gagaccgagcgcgccaagctgacgccgcagacgcggacgaccgaggcagaactgcgtgca
gactttgcccagatcatggccactggcttcagcctcgcccaagaagaggcgacggtcggg
atctgcggcatggcggtgccggtgtggatcgacgagcagcttgcgggggctttcagtgta
gccgtcccggcggtgcgattcgatgaacaattagccgagcgggtgcgccaattgctgctg
cgcttggcaggagcggtaaagtga
DBGET
integrated database retrieval system
