KEGG   Novosphingobium sp. THN1: C7W88_16405
Entry
C7W88_16405       CDS       T05635                                 
Symbol
traC
Name
(GenBank) type IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
not  Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:not00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:not02044]
    C7W88_16405 (traC)
Secretion system [BR:not02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   C7W88_16405 (traC)
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 TrwB_AAD_bind T4SS-DNA_transf CbiA AAA_16 nSTAND3 FtsK_SpoIIIE TraG-D_C DUF87 AAA_22 ABC_tran AAA_23 Mg_chelatase AAA_29 MeaB AAA_33 Fer4_NifH MobB PIF1 NACHT AAA_5 NPHP3_N ATPase_2 YobI-ATPase
Other DBs
NCBI-ProteinID: AXU20274
LinkDB
Position
3361773..3364316
AA seq 847 aa
MAEQLKTVVDRLLSGLLGDAEHADKARPQLMVDMLSDWLPYRVYDPATRLYFNARSKGFV
LSVTPLIGADERTGEILGQFFSEGLPAGACLQVLHLASPRISRIIAPWFAPRYIQGGVYE
AIARHRARRLYSLVWESGSPDAPFHARHHQVIVSVGVPTSKSVSNEDLKQTRDGLVAMLK
SLNLGVVEVGPEALIAVIDDLTSPTTAPQDDAVPYNPNDPIAAQAIRHDIELVVAEDRMR
LVTERFRPTGKVNDGVPEIGTVYPDAFDVRHFAVRNMPSRWAPWECARLIGDLFTDKLRF
PCPAATMLCLVYPDQEAASAKAGFKFMRTTSLAGTRSARFLPRIGEQAAEWQHVQAELQE
GRRLVRVFYGVTTYSPLGHGDRHERAIKSIYKAAGWDLTDERYLQIQGLLAAMPLTLADG
LGTDMERLKRFKTVLSTTAANIAPMQGEYLGSAHPHLLFVGRRGQPFFWSPFENEAGNHN
VAICGKSGSGKSVLLQEMCAALRGAGAQVVVIDDGRSFEHSVKLQGGRFVEFTIAAGFCL
NPFSMIDATRAAEDEDYRLDCFGMIKAIVGQMARHSAKLTDTERGLIDRAVNLVWAQHGA
AATVTTVGEVLAGLGHDTAADIATALAPYMAGGTYGAFFEGQASLDLDADFTVFEMSDLA
SREDLRSVVLSAIMFMTSQAMTRSPRSLRKLLLIDEAWSMLKGGSMGEFVETYARTCRKY
GGALATATQSLNDYYKSDGATAALENSDWMLILQQKPETIADFKASKRLDMDDRTETLIR
SLKRSGSDYSEVFIKGPETEAIGRLVLDDYSATLFSSSPQTFAAIDAEIARGHQLADAIE
RIAHPNR
NT seq 2544 nt   +upstreamnt  +downstreamnt
atggccgaacaactcaagaccgtcgtcgatcggctgctcagcggattgctgggtgatgcc
gagcacgccgacaaagcccgtccgcagctcatggtcgatatgctctccgactggctcccc
taccgggtctatgatccggcaacccgcctttacttcaacgcacgctcgaaaggctttgtc
ctctcggttacgccgctgatcggagccgacgagcgcaccggcgaaatcctgggacagttc
ttctcggaaggcctgccagcaggcgcctgccttcaggtacttcaccttgcaagcccgcgc
atcagcaggatcatcgccccgtggttcgccccacgctacatccagggcggcgtgtacgag
gcaattgcccggcaccgggcgcggcggctctattcgctggtttgggagtctggctcgccg
gatgcgcccttccatgcgcggcatcaccaggtcatcgtctcggtcggggtgccgacctcc
aagtcggtcagcaacgaggatctcaagcagacccgcgatggcctcgtggcgatgctcaag
tcgctcaatctcggcgtggtcgaagtcgggccggaagcgctcatcgctgtcatcgatgat
ctgacttcgcccaccaccgccccgcaggacgatgcggtgccctacaacccgaatgatcca
atcgccgcccaggcgatccgccacgacatcgaactggtggtggctgaagatcgcatgcgg
ctcgtgaccgagcgtttccgtcccactggcaaggtcaatgacggcgtgcccgagatcggg
acggtctatcccgatgccttcgatgtccggcattttgccgtacgcaacatgccatcgcgc
tgggccccgtgggaatgcgcgcggctgatcggcgacctgttcaccgacaagctgcgcttc
ccctgccccgccgccaccatgctgtgtctcgtctatccggatcaggaggctgcatcggcg
aaggccggattcaagttcatgcggacgaccagcctcgccggaacccgcagcgcgcggttc
ctgcctcggatcggcgaacaggccgccgagtggcagcatgttcaggccgagctccaggaa
ggtcgccggctcgtgcgggtcttctatggcgtgacgacctattcgccgttgggccatggc
gaccgccacgaaagggcgatcaaatcgatctacaaggcggcgggctgggaccttaccgat
gagcgctacctccagatccagggattgctcgccgcgatgccgctcaccctggctgacggg
ctcggcaccgacatggagcggctgaagcggttcaagactgtgttgtcgacgaccgccgcc
aatatcgcgcccatgcagggcgagtatctcggcagcgcgcacccccacctgctgttcgtc
gggcggcgcggccagccctttttctggtcgccgttcgagaacgaggccggcaaccacaat
gtcgcgatctgcggcaagtcgggatcgggcaagtcggtgctgctccaggagatgtgcgcc
gcgctgcgcggcgccggcgcccaggtggtcgtgatcgacgatggccgcagcttcgagcac
tcggtcaagctgcagggcggccgctttgtcgagttcacgattgcagcgggcttctgcctc
aacccgttctcgatgatcgatgcgacccgcgccgccgaagacgaggactaccgcctcgac
tgcttcgggatgatcaaggccatcgtcgggcaaatggctcgccacagcgcgaagctgacg
gatactgagcgcggattgatcgaccgggcggtcaacctcgtctgggcgcagcacggcgcg
gctgccacggtcactactgtcggcgaagtgctggccggtctcgggcatgacactgccgct
gacatcgcaaccgcgctggccccctatatggcgggcggaacctacggcgccttcttcgaa
ggccaggcgagcctcgacctcgatgcagacttcacggtcttcgagatgtccgacctcgcg
agccgggaggatctgcgaagcgtcgtcctctcagccatcatgttcatgaccagccaagcc
atgacgcgaagcccaaggtcgctgcgcaagcttctgctgatcgatgaagcctggtcgatg
ctcaagggcggttcgatgggtgaattcgtcgaaacctacgcccggacctgccgcaaatat
ggcggcgcgctggcgaccgctacccagtcgctcaacgactactacaagtcggacggggcg
acggcggcgctcgagaacagcgactggatgctgatccttcagcagaagccggagacgatc
gccgatttcaaggcgagcaagcgcctcgatatggacgatcgcaccgagacgctgatccgc
agtctcaagcgctccgggagcgactattccgaggtgttcatcaaggggccggagaccgag
gcgatcgggcggctcgtgctcgatgactattcggcaacgctcttctcgagttcgccccag
acctttgccgccatcgatgccgagatcgcgcgcgggcaccagctcgccgatgccatcgag
cgcatcgctcatcccaaccgctga

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