Novosphingobium sp. THN1: C7W88_17910
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Entry
C7W88_17910 CDS
T05635
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_17910
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7W88_17910
Archaeal homologous recombinant proteins
C7W88_17910
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Ortholog
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
AXU20889
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All DBs
Position
pTHN:177178..178323
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AA seq
381 aa
AA seq
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MRILHTSDWHLGRQVHGLSLDEDHNHILVQILAVIADKRPDVVIIAGDIFDRANPPQSAI
TRLSQFLTSVRAASDAAIVMIAGNHDSAAHIGAMGVLADGGVAIVRGPLDDDERPLVISD
VHGPVAISALPFAFEYAARMCFEDDGIACPADVIRAQLASARKHVAEGMRWVVVAHAFVD
GAATSESERPLTRMVGGIETVSAAAFEGAHYVALGHLHRPQPVGLDHIRYSGAPLAFGFD
EEGQQKSVSLIDLAADGTVTVAEVPLQSLRQVRTIRGKLLELLATTEVSDDIVRVVLTDK
VPQIDPMKRIRTFYPNAVQLSYEDTERPVAQRLDEQRAVIEDPQTLSSAFLEFIRGEPLS
EAERQIVASALQTFATMEEGA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcttgcacaccagcgactggcatctgggccgccaagttcatggcctgtccctc
gatgaagaccataaccacatcctcgtccagatcctcgcggtgatcgctgataaacgcccc
gacgtcgtgatcatcgccggggatatcttcgaccgagccaacccgccgcaaagtgcgatc
acccgcctttcgcagtttctcacgagcgtgcgtgcagcatccgatgcagcgatcgtcatg
atcgcaggcaatcacgattccgccgcacacatcggggcgatgggcgttcttgccgatggc
ggcgttgcgattgtgcgcggaccactggatgacgatgagcgaccgctcgtgatctcggat
gtgcatgggccagtggccatctccgccctgccctttgccttcgaatacgccgcccgcatg
tgcttcgaagacgacggcatcgcctgccctgcagatgtcatccgagcacagcttgccagc
gctcgcaagcacgtggctgagggaatgcgttgggttgtcgtcgctcacgcttttgtcgac
ggcgctgctaccagcgagagcgaacgcccgctcacgcgtatggtcggcggcatcgagaca
gtgtcggcggctgcctttgagggcgctcattacgtggcccttgggcacctccaccgcccg
caaccggtgggacttgatcacatccgttactccggcgcacctttggcattcgggttcgat
gaggaaggtcagcagaagtcagtcagcctgatcgaccttgcggccgacggcactgtcacg
gtggccgaagtgccgctgcagtcgctgcgtcaggtcagaaccattcgaggcaagctgctt
gagctgctcgcaaccacagaagtctccgacgacatcgtccgggtcgttctcacagacaaa
gtgccgcagatcgacccgatgaaaaggatcaggacattttatcccaatgccgtccaactc
tcatatgaggacaccgagcgccccgtagcgcagcgcctggacgaacagcgtgctgttatt
gaagacccacagacactctcctcggctttccttgaatttatccgcggtgagccattgtcg
gaggcggaaaggcagattgtggcctccgctctgcaaactttcgctaccatggaggaaggc
gcatga
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