Novosphingobium sp. THN1: C7W88_19620
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Entry
C7W88_19620 CDS
T05635
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_19620
Transporters [BR:
not02000
]
Other transporters
Pores ion channels [TC:
1
]
C7W88_19620
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AXU21158
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All DBs
Position
pTHN:562143..564845
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AA seq
900 aa
AA seq
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MKGKRIGASRAMLKLGCCALAITISGAAFAQEAAQDTPEEAAASNAEIIVTGSRVRGEAP
VGSTVTTLGRKEIEASSQVTVDRMIKEIPQVFDLGVSENSRGQSGGSGNITYGNSVNLRG
IGPYATLVLVDGHRVTNNSRSIDPSVIPSLGIERVEVVADGASAIYGSDAVAGVVNLIPR
RSLDGGEVFARAGISSRGDFHEYTLGAALGKVFERGQIMVAYEHVERSNLSGDDRDFFTS
DQRRFGGGDYRIVRCAPGNINANGTTYAIPTSGVTQGTAGSLNAGTLNKCDELDNQDLIP
RQKYDSVNSTGRYELTDWLDLFYDGFYSKRSFYRISAYSNARLTVPQTNAFFVRPDGFTG
SSYTLDYNFRNDLPTNDSYGYARSWQITPGLKAKLPGGWEAEALFGYGKTNDFSGSYFGV
NNAALNAALASSNPATAFDPYGLGRTSQAVLDGIANQIFLAPTNGRLRTYEARLNGGLFA
LPGGEVKLATGYERQDFKVALGSARGAPTNPITFRNFGRKVDSFYGELFIPVFGPDNAMP
GFQRLEINAAVRHDKYSDVGSTTNPKFGVNWVPVDGIKLRGSYGTSFRAPTIPEIYGNSN
NLFGQSYQNPAGGAPLQGYALSGPNLDLKPETATSWSVGADFEPTRNLRFSVTYWDVNYK
NQVLANLSNLAILGTEAQYAGTGIILRGTDAATRVQQLLAQGVTLAGGSFPGGSPANVTL
FVDGRSQNLGVSITRGIDFTATWRAELGSEDALTFNASGTYLTKYRVALTPKAPLIDRLD
FIFNPLKFKARGSVTWDHGPFSARVQAIHVGGYFNNLTVGGQNVKSYTPVDLNLTFRIGD
QQASGFFEKGMTLGLEVRNVFDTDPPYVNLAPSGNGSGGYDATASDPIGRLFAVSLRKSF
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaagaggatcggggcctcgcgggccatgctgaagctgggctgctgtgcgctg
gctatcaccatttccggtgcggcattcgcgcaggaagcggcgcaggatacgcctgaagag
gctgcagcgagcaatgccgaaatcatcgtgacgggcagccgcgtgcgcggcgaggcgccg
gtcggctccaccgtcacgacgctgggccgcaaggagatcgaggcttcgagccaggtcacc
gtcgaccgcatgatcaaggaaatcccgcaggttttcgacctcggcgtttcggaaaactcg
cgcgggcaatcgggcggcagcggcaacatcacttatggcaactcggtcaacctgcgcggc
atcggaccttatgccacgctggtgctggtcgacgggcaccgcgtgaccaacaacagccgc
tcgatcgatccttcggtcattccttcgctgggcatcgagcgcgtggaagtcgtcgccgat
ggcgcttcggcgatctacgggtccgacgcggtggcgggcgtggtcaacctgatcccgcgc
cgctcgctcgatggcggtgaagtgtttgcccgcgccggcatttccagccgcggcgatttc
catgagtacacccttggcgccgcgctgggcaaagttttcgaacgcggccagatcatggtt
gcctacgagcatgtcgaacgctccaacctttcgggcgacgaccgcgatttcttcaccagc
gaccagcgtcgtttcggcgggggcgactatcgcatcgtgcgttgtgcccccggcaacatc
aacgccaacggcacgacttacgcgattcccaccagtggggtcacgcagggcactgccggt
tcgctgaatgcaggcacgctcaacaagtgtgacgagctggataatcaggacctgatcccg
cgccagaagtatgactcggtcaacagcaccggccgctacgagctgaccgactggctagac
ctgttctacgacggcttctattccaagcgttcgttctaccgcatctccgcctattcgaac
gcgcgcctgacggtgccgcagaccaatgccttcttcgtacggcccgacggcttcaccggc
tcgagctacacgctcgactacaacttccggaatgacctgccgaccaacgattcctatggc
tatgcccgctcgtggcagatcacgccgggcctgaaggcgaagttgccgggcggctgggaa
gccgaagcgctgttcggttatggcaagaccaacgatttctccggctcctacttcggcgtg
aacaatgccgcgctcaacgctgcgctcgccagcagcaatccggcgacggcgttcgatccc
tatggcctcggccgcaccagccaggccgtgctcgatggcatcgccaaccagatcttcctc
gcgccgaccaatggccgcctgcgcacctacgaagcgcggctcaacggcgggctcttcgcg
ctgccgggtggcgaggtgaagctggcgacgggatacgagcggcaggacttcaaggtcgcg
ctcggctctgcacgcggtgcgccgacgaacccgatcaccttccgcaacttcggacgcaag
gtcgattcattctacggcgaactgtttatcccggtgttcgggcccgacaacgccatgccc
gggttccagcgcctcgagatcaatgccgcggtccgtcatgacaagtatagcgacgtcggc
agcacgaccaatcccaagttcggcgtgaactgggtgccggtggacgggatcaagctgcgc
ggcagctatggcacatcgttccgcgcgccgacgatccccgagatctacggcaattccaac
aacctgttcggccagtcctaccagaacccggcgggcggtgcgccgttgcagggttatgcc
ctgtcgggcccgaaccttgatctgaagcccgagacggcgacgtcatggtcggtcggtgcg
gatttcgaaccgacccggaacctgcgcttctcggtcacctattgggacgtgaactacaag
aaccaggtgctggcgaacctctcgaacctcgccatccttggcaccgaggcgcagtatgca
ggaacgggcatcatcctgcgcggcaccgatgccgccacgcgcgtgcagcagctgctggcg
cagggcgtgacgctggcaggcgggtcgttccccggtggcagcccggccaacgtgaccctg
ttcgtcgacgggcgcagccagaaccttggcgtctcgatcacccgtggcatcgacttcacc
gcaacctggcgtgccgagctgggcagcgaggatgcgctgacgttcaacgcttcgggcacg
tacctgaccaagtaccgcgtggcgctgaccccgaaggcgccgctgatcgaccggttggac
ttcatcttcaacccgctgaagttcaaggcgcgcggcagcgtcacctgggatcacgggccg
ttcagcgcacgtgtccaggcgatccatgtcggcggctacttcaacaacctgacggtcggc
ggccagaacgtgaagagctataccccggttgaccttaacctgacgttccgcatcggtgac
cagcaggcgagcgggttcttcgagaagggcatgacgctcggcctcgaagtgcgcaacgtg
ttcgacactgatccgccctacgtgaacctcgcgccgagcggcaacggtagcggcggctat
gacgccaccgccagcgatcccatcgggcggctgtttgcggtaagcttgcgcaagtcgttc
tga
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