Novosphingobium sp. THN1: C7W88_20030
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Entry
C7W88_20030 CDS
T05635
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_20030
Transporters [BR:
not02000
]
Other transporters
Pores ion channels [TC:
1
]
C7W88_20030
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
YjbH
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AXU21217
LinkDB
All DBs
Position
pTHN:666821..669010
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AA seq
729 aa
AA seq
DB search
MKKMSAVKGALIAGVAMGAMPITAWAQSAAPAEEEAAPAEEMVVIGQRQQYRGDVPLASI
PQSVQVLDAKTLQNLNITRFDAALDLSSGVSRQNNFGGLFDGFAIRGFAGDENFAGGVLV
NGFNGGRGYGGPRDASNIEKIEILKGPNGAVFGRGEPGGTISITTKKAKIGDTFGTFAVQ
GGSWNTYRVEADYNLSISDTVAIRLNGAAQDGDSFRDTIHQTLYTANPSILFAPSKDTSI
SYEMEFMHNRVPFDRGTIAVNNKLGVVDRSTFFGEPADGDMRVDVLGHQVQFQQKLGGDW
YFLAGLGYRETEFKGLSSEAELDPLGTNRRQTLGKPGNFLARQRRSRDYSTDNLVVRGEI
SGKFYTGGITHHVLLGADWDRFRIDLLQLRGRPVNYTAGAPVTAANYAVDIFNPVYGQTL
ALGATPLTNTYETQKAWGVYFQDQMDLTDRLKLRVGGRYDNYRQTVLNRNNTNPATNTVR
VHIKQFSPTAGALYEINDDLSIFAGYGEGFRPNSGVDAASRPFPAEMSKSYEVGLRLGEP
GGALSGSIAAFTMKKNNILTADTNPANAGFSIAGGAARSRGVEVDFNANLPGDISIIATY
AFLDAEWTTAAGDKDFGLAIKPGDRLINIPKHAANLIVNKGFTLGEQRFTLGAGVNYVGK
RLGETGTTFELPGYIIARVMASYEPADNIKLTADVTNLFDKEFYTASYSRFWIAPGAPRA
FNVRATFTF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgtccgcagtaaaaggcgcgctgattgccggcgttgccatgggagcgatg
ccgatcactgcctgggcgcaaagcgcagcccccgcagaggaagaagcggcccctgccgag
gaaatggtcgtcatcggccagcggcagcaatatcgcggcgacgttccgctcgcctccatt
ccgcagagcgtgcaggtgctggatgccaagacgctgcagaatctcaacatcacccgcttc
gatgccgcgcttgatctttcgagcggggtttcgcgccagaacaacttcggtgggctgttc
gacggatttgccattcgcggctttgccggtgacgagaacttcgcaggcggtgtgcttgtc
aacggtttcaacggcggacgaggctacggtggcccgcgcgatgcatcgaacatcgagaag
atcgaaatccttaaaggtccgaatggcgcggtgtttggccgtggcgagcctggcggcacg
atcagcatcacgaccaagaaggccaagatcggcgacacgttcggcacctttgccgttcag
ggcggcagctggaacacttaccgcgtcgaagcagactacaatctttcgatcagcgatacc
gttgcgatccgcttgaacggcgcggcacaggatggtgacagctttcgcgacaccattcac
cagacgctctacacggccaacccttcgatcctgttcgcacccagcaaggacaccagcatc
tcctatgagatggaattcatgcacaaccgcgtgccgttcgatcgcggcacgattgcggta
aacaacaagctcggcgtggtcgatcgttcgaccttcttcggcgaaccggccgatggggac
atgcgggtggacgttcttggccatcaggtgcagttccagcagaagctgggcggcgactgg
tacttccttgccggccttggctaccgcgagactgaattcaagggtctttcgagcgaggct
gagcttgacccgctgggcaccaatcgtcgccagaccctgggcaagccgggcaatttcctg
gcccgccaacgccgttcacgcgattacagcaccgacaaccttgtcgtgcgcggcgaaatc
tcgggcaagttctacaccggcgggatcacccaccacgtgttgttgggcgcggactgggat
cgcttccggatcgacctgctgcaactgcgcggccgcccggtcaactacaccgccggcgca
ccggttaccgccgcgaactatgcagtcgatatcttcaacccggtctatggccagacgctg
gctcttggcgcgacgccgttgaccaacacatacgaaacgcagaaggcctggggcgtctac
ttccaggatcagatggacctgactgacaggctgaagttgcgcgttggcggtcgttacgac
aactatcgccagacggtgctgaaccggaacaacacgaaccctgccaccaacaccgtgcgg
gtccacatcaagcagttcagcccgacggccggtgcgctttacgagatcaacgacgatctt
tcgattttcgcagggtatggcgaaggcttccgtccgaacagcggggtcgatgcagccagc
cgtccgttcccggcggaaatgagcaagtcctatgaagtgggccttcgacttggtgagccc
ggtggagcgctgagcggctcgatcgctgccttcacgatgaagaagaacaacatcctgact
gccgatacgaacccggcaaatgctggattttcaatcgccggcggtgcggcgcgctcgcgc
ggcgtggaggtggacttcaacgccaaccttccgggcgacatttcgatcattgccacgtac
gccttcctcgatgccgagtggaccacggcggcaggggacaaggacttcggactcgccatc
aagcctggcgaccggctcatcaatattcccaagcacgcggcaaatctcatcgtcaacaag
ggctttaccctgggtgagcagcgcttcacgttgggtgcgggcgtaaactatgtcggcaag
cggttgggcgagacgggcacgaccttcgagttgccgggctatatcatcgcacgcgtgatg
gcgagctatgaaccggctgataacatcaagctcactgcggacgtgaccaatctgtttgac
aaggagttctacacagcgtcctactcgcggttctggattgcgccgggtgcgccgcgggcg
ttcaacgtgcgcgctaccttcacgttctga
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