Novosphingobium sp. THN1: C7W88_20060
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Entry
C7W88_20060 CDS
T05635
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K02034
peptide/nickel transport system permease protein
Organism
not
Novosphingobium sp. THN1
Pathway
not02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
not00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C7W88_20060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_20060
Transporters [BR:
not02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C7W88_20060
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AXU21221
UniProt:
A0A3B7DZ07
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All DBs
Position
pTHN:674339..675160
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AA seq
273 aa
AA seq
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MANLVRRAMRLPLSGKIGLALVLFWIVVAVIGPWIAPYPPGSFVNEEVFAGSSSAYWLGS
DFLGRDVLSRLLSGARFTVGLSAIAVAIAAGIGTGLALTAAVGPRWLDELLSRSMDTLIS
IPSKIFALVLVAAFGSSLVLLTMIIAITYVPGNFRIARSLAVGLAKLDYVEVARARGEGR
LHLALVEVLPNMIKPLFADIGLRFVFIVLLLSGLSFLGLGLQPPDADLGSLVRENTSGLA
EGALAIVAPAVAIASLTVGVNLLIDAATQGKAE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctcgtccgccgcgccatgcgcttgccgctctcgggcaagatcggtcttgcg
ctcgtgcttttctggatcgtggttgcggtaatcgggccatggatcgcaccctacccgccg
ggttccttcgtgaacgaggaagtctttgccggatcgagcagtgcctattggctgggaagt
gacttcctggggcgcgacgtgctgagccgcctgctttccggggcgcgctttacggtgggg
ctttcggcgatagcggtggcgattgccgccgggatcggcaccggccttgcgttgacggcg
gcggtggggccgcgctggcttgacgaactcctctcgcgatcgatggacacgctcatctcg
atccccagcaagatctttgcgctggtgctggtggcggcattcggatcgtcgctggtgctg
ctgacgatgatcatcgcgatcacgtacgtgcccggcaatttccgcatcgcccgttcgttg
gcggtagggctggccaagctcgattatgtcgaggtggcgcgtgctcggggcgaggggcgg
ttgcacctggcgctggtggaagtgctgcccaacatgatcaagccgctgtttgccgatatc
ggcctgcgcttcgtgttcatcgtgctgctgctgtctggcctcagcttccttggcctcggg
ctgcagccgcccgatgccgatctgggatcgctggtgcgcgagaatacctccgggcttgct
gaaggcgcgctggcaatcgtcgccccggctgttgcgattgccagcctgaccgttggcgtg
aacctgctgatcgatgccgccacgcaggggaaggccgaatga
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