Novosphingobium sp. THN1: C7W88_20065
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Entry
C7W88_20065 CDS
T05635
Name
(GenBank) ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
not
Novosphingobium sp. THN1
Pathway
not02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
not00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C7W88_20065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_20065
Transporters [BR:
not02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C7W88_20065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
AAA_29
AAA_22
nSTAND3
PRK
NACHT
AAA_19
CbiA
AAA_25
ATP-synt_ab
APS_kinase
AAA_24
nSTAND1
DUF87
Mg_chelatase
RsgA_GTPase
CoaE
Zeta_toxin
ABC_ATPase
IstB_IS21
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
AXU21222
LinkDB
All DBs
Position
pTHN:675157..676965
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AA seq
602 aa
AA seq
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MTMQPHVNVRGLCVTVRAADGSPLRIVDDVSFAIRRGEVLALIGESGSGKTTIALSLMGY
ARGGAKISGDISVGTATLDGAAANSLAAQRGHRITYVAQSAASAFNPSRRVIEQVIEPAL
IHGTASDADARKYAVELFGSLALPNPQTIGSRYPHELSGGQLQRLMAAMALITKPDLVIF
DEPTTALDVTTQVEVLQAFRDVVREQGATGVYVSHDLAVVAQMADRVLVLNRGKVREQNT
VRAVLETPADDYTRTLLAAAKPVVKAAAPTPAEGAPLLSIEGIHAGYGPIDRNGHPAHPV
LSDVSLTVPRGGAVGVIGESGSGKSTVARVVAGLLAPTAGTVLLDGHPLAASLSARSREE
LRRIQIVFQNADVALNPAHSVGEILGRVLRFYHGMSGPAAKARVAELLDLIKLPVGVADR
RCDELSGGQKQRVNLARALAANPDVILCDEVTSALDTVVREAILELLAELRRDLGVAYLF
ISHDIATVKALCDEIVVLYKGTRVEAGLSRTYDAPPYHPYTDLLISSVPELRTDWLSGVA
HKGKSQVGLPVDDAGLCRFLPRCPAAIAGRCDTSPPPLRSMTAGNLLLCHRTEAELAGCE
IQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcagccccatgtgaacgtgcgcggcctgtgcgtgactgtccgtgcggctgac
ggctcacctttgcgcatcgtcgatgacgtctcgtttgccatccggcgtggcgaggtgctg
gcgctgatcggggaatccggttcgggcaagacgacgattgcactgtcgctgatgggctat
gcccgaggcggggcgaagatctcgggcgacatttccgtgggcacggcgacgctggatggc
gccgccgccaatagcctggccgcgcagcgcggacaccgcatcacctatgtcgcccagagc
gcggcttcggcgttcaatccttcgcgccgggtgatcgagcaggtgatcgagcctgcgcta
atccatggcacggcttcggatgccgatgcgcgaaaatatgcggtcgaactgttcggatcg
ctggcgctgccgaatccgcagaccatcggcagccgttatccccacgagctttccggcggg
cagttgcagcgcctgatggcggcgatggcgctgatcacgaagccggatctggtcatcttc
gacgagccgaccacggcgctggacgtgacaacgcaggtggaagtcctgcaggctttccgc
gacgttgtgcgagagcagggcgcgaccggtgtctacgtttcgcacgatctggcggtcgtt
gcccagatggcggaccgcgttctcgtgctcaatcgcggcaaggtgcgcgagcagaacacc
gtgcgtgcggtgctggagacacccgccgacgattatactcgcaccctgctggccgcagcc
aagccggtcgtgaaggcggcggcgcccactccggcagaaggcgcgccgctgctttcgatt
gagggcatccatgcaggttatggcccgattgacaggaacggacatcccgctcacccggtg
ctgagcgatgtcagcctgacggtgccgcgtggtggcgctgtgggggtgatcggggaatcg
ggctcgggcaaatcgactgtggcgcgcgttgtggcaggcttgctcgccccgaccgccggg
acggtgctgctcgacgggcatccgctggccgcatcgttgagcgctcgcagtcgcgaggaa
ctgcgtcgcatccagatcgtgttccagaatgccgacgtggcactgaatccggcgcatagc
gtgggcgaaattctcgggcgggtgctgcgcttctaccatggcatgagcggccctgcggcc
aaggcacgcgtggccgaactgctcgatctgatcaagctgccggtcggcgttgcagaccgg
cgttgcgacgagctttcgggtgggcagaagcagcgcgtgaacctggcccgggcactggcc
gccaatcctgacgtgatcctgtgcgacgaggtgacctcggcgcttgataccgtggtgcgc
gaagcaatcctggaacttctggccgaattgcgccgcgatcttggcgtggcctatctgttc
atcagccacgatatcgccacggtgaaagcactgtgtgacgagatcgtcgtgctttacaag
ggcacgcgcgtggaagcaggcctgagccgtacttacgacgctccgccctatcatccctat
accgacctgctgatctcctctgtgccggaattgcgcacggactggctttccggggtagcg
cacaagggcaagtcgcaggtcggcctgccggtggacgatgccgggctgtgccgctttctg
ccgcgctgcccggcggcgatcgcgggacgctgcgatacgagcccgccgccgctgcggtcc
atgactgctggcaatctgctgctttgccatcggacagaggccgagctggcgggctgcgaa
attcaataa
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