Novosphingobium sp. THN1: C7W88_20205
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Entry
C7W88_20205 CDS
T05635
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
not03000
]
C7W88_20205
Transcription factors [BR:
not03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
C7W88_20205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_11
HTH_23
HTH_Tnp_ISL3
GntR
MarR_2
HTH_IclR
Sigma70_r4_2
CggR_N
HTH_50
NirdL-like_HTH
Sigma70_r4
HTH_20
HTH_28
Fe_dep_repress
NapD
HTH_29
PaaX
HTH_DeoR
GcrA
HrcA_DNA-bdg
HTH_36
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AXU21241
LinkDB
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Position
pTHN:complement(708308..708832)
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AA seq
174 aa
AA seq
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MIDSFPQTDDLDRQIAEALAEDARLSFRKIAVDLGVTEGTVRGRVKRLQSAGLLKLVPIV
DIARGLDATNAGQHMMFVTVKCASGKLDAVREGLLALPQVRALYDANAALRLIAICVLPS
LDDAAAVTNQVLALDGIREAETELVLQTVKYNAAIGPIATVEDLRGVDRGTAPG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactctttcccccagaccgacgatctcgaccgccagatcgccgaagctctggcc
gaagacgcgcgcctttctttccggaagatcgctgtggacctgggggtcacggaaggcact
gtgcgcggccgggtcaagcggctgcagagcgcaggactgctcaagctcgtccccatcgtc
gatatcgcgcgagggctggatgccaccaatgccgggcagcacatgatgttcgtcacggtc
aagtgcgccagtgggaagctcgatgccgttcgcgaaggcctgctcgccctgccccaggtc
cgcgcactctatgacgccaacgccgcgctgcgcctgatcgccatctgcgtcctgcccagc
ctcgatgatgccgccgccgtcaccaatcaggttctcgccttggacggcatccgcgaggcc
gaaaccgagcttgtcctgcagaccgtgaagtacaacgccgccatcggcccgattgcaacg
gtggaagatctgcgcggggtggatcgcggaacagcgccggggtga
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