Novosphingobium sp. THN1: C7W88_20400
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Entry
C7W88_20400 CDS
T05635
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_20400
Transporters [BR:
not02000
]
Other transporters
Pores ion channels [TC:
1
]
C7W88_20400
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AXU21272
LinkDB
All DBs
Position
pTHN:750475..753045
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AA seq
856 aa
AA seq
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MKVTTCARLSVRLMLGASLATMTLGSAAYAAEEQAQTAGDQAVDGQGQLEQIVVTAQKVE
QNLQDVPLAISAISADKVEKLGIRDAKDLSGLAPNVTIVQGTTNANAAVISIRGIPTPAT
ETFGLDTANGLYVDGVFIARSGGSALDVIDVARVEVLRGPQGTLFGRNTTGGGIAFISRA
PSKTFKLNAEAGYGNYNAFNGKITLDPGEIAGISTSFTYSHRQRNGTVDNLNEPDDARDP
GARKGDSFRVAAKAEIGGTGSIQYIFDWSKIDASPINFQLTNAASGAVRPPEVVGGVPVV
VTQQAPVAPFLNTVNFLDPRCAALATPTRDWRRTVCNDINSRSTDKAWGHNVQVQNDFGV
FHLKSTTGYRFWNNDSVTDLDGIGAFTAPRFTQASLFNGMPASLLQFIPSIPANFRPFIA
ASPVPTVQQNLFDTNNKRRHKQFSQEVEIGNESDSLDWVLGGFYFWEKGSEYNPQNSGFV
LDTNSIFLGNFGPLGPSFVAANPARYRLVQTLSVLDYTATAESTAVYGQATFYPGGKDSG
LRLTAGGRYTWDTKSMVRRQNGTAPLATPEQGRASYSKFTWNLMLGYDLSDQVNLYARVA
TGYRSGGFNAQDPAVAGVLPSFKPENVTSYEVGLKSELFDRKVRFNLAGYYNEYKDLAIA
VPITNLAPGTFATKVTNAGKVTYTGVEAELTAVLTDNFTFEANAGYVDIKYKEFLAGLPV
AANQPLVNIASYATPGYTSPFTANVALNAQFPLSDNGMRLTGRVSYAYEDGKYSFSNVLS
SPYNEVLKGDNRNIVDAQVAIDRIPLAGSEAAVRFWVKNLTDEHNLVRAIDFGQLGYGGG
YYADPRTYGVTVGVKF
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaccacttgcgcgcggctgtctgtgcggctcatgctcggcgccagcctcgcg
acgatgactctgggttccgctgcctacgcagccgaggaacaggcgcagaccgctggcgat
caggcagtcgacgggcagggccagctcgagcagatcgtagtcaccgcgcagaaggtcgag
cagaacctgcaggacgtgccgctggcgatcagcgcgatcagcgccgacaaggtcgagaag
ctgggcatccgcgacgccaaggacctttcgggcctcgcccccaacgtgaccatcgttcag
ggcaccaccaacgccaacgccgctgtcatctccatccgtggcattcccacccccgcgacc
gagaccttcggcctcgacaccgcaaacggcctctatgtcgatggcgtgttcatcgcccgc
tcgggcggcagcgcgcttgacgtgatcgacgttgcgcgcgtcgaggtgctgcgcgggccg
cagggcacactgttcggccgcaacaccacgggcggcggcatcgccttcatctcgcgcgcg
ccgtccaaaacgttcaagctgaacgccgaggccggttacggcaactacaacgccttcaac
ggcaagatcacgctcgatccgggcgagatcgccggcatctcgaccagcttcacctacagc
caccgccagcgtaacggcacagtcgacaacctcaacgagcccgacgatgcgcgcgatccc
ggcgcgcgcaagggcgattccttccgcgtggccgccaaggccgagatcggtggcacgggg
tcaatccagtacatcttcgactggagcaaaatcgatgcttcgccgatcaatttccagctg
accaatgccgccagcggagccgtgcgcccacccgaagtggtaggcggcgtgccggttgtg
gtgacgcagcaggccccggtcgcgccgttcctcaacaccgtgaacttccttgatccgcgc
tgtgccgcgcttgccacccccacgcgcgactggcgccgtacggtgtgcaatgacatcaac
agccgttcgaccgacaaggcctggggccacaacgtgcaggtccagaacgacttcggcgta
ttccacctgaagtcgaccaccggctaccgcttctggaacaacgacagcgtcaccgacctt
gacggcataggggccttcaccgcgccgcgcttcacgcaggcgtcgctgttcaacggcatg
ccggcaagcctgctccagttcatcccgtcgatcccggcaaacttccgtccgttcattgcg
gcatcgccggtgccgaccgtgcagcagaacctgttcgacaccaacaacaagcgccgccac
aagcagttcagccaggaagtggaaatcggcaacgagagcgacagcctcgactgggtgctc
ggcggtttctacttctgggagaagggttcggagtacaacccgcagaatagtggcttcgtg
ctcgataccaactcgatcttcctcggcaacttcggcccgctcggcccctcgtttgtcgcg
gccaacccggcccgctaccgtctggtgcagacgctgtcggtgctcgattacaccgcgacg
gccgagagcactgcggtctatgggcaggcgactttctaccccggcggcaaggacagcggc
ctgcgcctgacggcaggcggtcgctatacgtgggataccaagtcgatggtgcgccgccag
aacggcaccgccccgcttgccacgcccgagcaggggcgcgccagctacagcaagttcacc
tggaacctgatgctcggctatgacctgtccgatcaggtcaacctctatgcccgcgtggcg
accggctatcgttcgggcggcttcaacgcgcaggacccggcggtggccggcgtgctgcct
tcgttcaagccggagaacgtgacgtcctacgaagtgggcctgaagtcggaactgttcgac
cgcaaggtgcgcttcaacctcgccgggtactacaacgagtacaaggatctggcgatcgct
gtgccgatcaccaaccttgctccgggcactttcgccaccaaggtaacgaacgccggcaag
gtcacttacaccggcgtcgaggccgaattgacggcggtgctgaccgataacttcaccttc
gaggcgaacgccggttacgtcgacatcaagtacaaggagttcctcgccgggcttccggtt
gccgccaaccagccgctggtcaacatcgccagctatgcgacgccgggctatacctcgccg
ttcaccgcgaacgtggcgctcaacgcgcagttcccgctttcggacaacggcatgcgcctg
accggccgcgtcagctatgcctatgaagatggcaagtacagcttctcgaacgtgctgtcc
tcgccgtacaacgaggtgctcaaaggcgacaaccgcaacattgtcgacgcacaagtcgcg
atcgatcgcattccgctggccgggagcgaggcggcggtacgcttctgggtcaagaacctg
accgatgagcacaacctcgtccgcgcgatcgacttcggccagctcggctatggcggcggc
tactacgctgatccgcgcacctatggcgttaccgttggcgtgaagttctga
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