Novosphingobium sp. THN1: C7W88_20540
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Entry
C7W88_20540 CDS
T05635
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_20540
Transporters [BR:
not02000
]
Other transporters
Pores ion channels [TC:
1
]
C7W88_20540
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Autotransporter
MipA
Motif
Other DBs
NCBI-ProteinID:
AXU21292
LinkDB
All DBs
Position
pTHN:783894..786365
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AA seq
823 aa
AA seq
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MKIDNLKFMLLLGASMPAMTVPAAAMASEPAEAPPQAVEEALSNEIIVTATRQSQKLQDV
AMTVNVATGEQLEKFKIFDVKDVAQLAPGLELTNTTGRNNTTTLRGITFDPDQGTGPAVQ
VYYNEIPSDAQTVYTAIYDIKQIEVLRGPQGLLRGLSAPAGAITIATRRPNFTKPEGYAE
LTGTTRDGYNAQMGASLPFSEKFAIRVAALVDGNRLNNVTNIQTGQRSQSRTESGRITLG
WKPTDSFTGYLTYQYLEADNRQFQQVIGSGNAPYSQYFNIPVPGVGNVPAPLAGVFIPDT
TIRSGPALTTDDYASVQDGRFRSVNKSHLVNLNLEYDLGAATASFVGAYQSSNIKTERDL
DVTNALPGFVQYSNVDVPYKVATGELRLSSNNTEGLGWGLGAFYTKQTGTTVVNQDASQF
WYAVNPNALVNLPFAAIGLPNVPGFTPFPLPNTLGIATRVNVPVYSQTWSFNANLRYRSG
PLSIEGGVRYSILKNVQTTQLTLTGAVQDGPREIVPVNLQRNTNKPITGGVNISYAIMPD
LNVFAAYGHSFRAGSTGVALPNGLSNDLIRTNPEKSDSFEAGIKGTIFDRRVNYAISGYY
QKIDNFLSRFSGIYYNAPANQPQTGFFDFNYNADATIKGVEASFDGRVSDNWDLGVSAAY
TKARFDNARVPCTDFAGTGVPNQNGTPKVTGNGNVSYCIAKGRLAEVPDFSLTANTELRL
PMDSFTPFVRALFTYRPGFDSERAQFTYQSRELLNMFVGVRTNDGKWELDVFARNLLDQR
RITVRGLGLGTVDSLIAGTFNSGYRQVNMTNPREFGATLKFNW
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgacaaccttaaattcatgctgctgcttggagcaagcatgccagcgatgacc
gtgccggctgccgcgatggcctcagaacctgcagaagccccaccacaggcggtagaggaa
gccctgagcaacgaaatcatcgttaccgccacccgccagtcgcagaagctgcaggatgtg
gcgatgacggtaaacgtcgcaacaggcgagcaactcgaaaagttcaagatcttcgacgtc
aaggatgtggcacaactcgcccccggccttgaactgaccaacacgacaggccgcaacaat
acgaccactttgcggggcatcactttcgatcccgatcaggggactgggccagccgtccaa
gtctattacaacgaaattcctagtgacgcccagaccgtctacactgcgatctacgatatc
aagcagatcgaagtactgcgcgggccacagggcctgctgcgtggtctttctgccccggct
ggtgcaattaccatcgccacacgccgcccgaacttcaccaagccggaaggctacgccgag
ctaaccggcaccacccgcgacggctataacgcgcagatgggtgcgtcgctgcccttctcg
gaaaagtttgccattcgagtcgccgcactggtcgatggcaatcgactaaacaacgtgacc
aacattcagactggccagcgctcacagagccgcaccgagagcggacgaatcacattgggc
tggaagccgaccgacagttttacgggctacctgacgtaccagtatctcgaagccgacaac
cgtcagttccagcaggtcatcggttccggaaacgccccatatagccagtacttcaacatc
ccggttccaggagttggcaacgttcccgcccctcttgcgggcgtattcattccagacacg
acaatccgttcagggccggcgcttactactgatgactacgcctcggtgcaggacggccgc
ttccgcagcgtcaacaagtcgcatctggtcaacctcaacctcgaatatgatctcggcgcg
gccactgcgtcgtttgtcggggcctaccagtcgagcaacatcaagaccgagcgcgatctg
gacgtcaccaatgccctgccgggctttgtccagtattcgaacgttgatgtgccgtacaag
gtggcgaccggtgaacttcgcctcagctcgaacaacaccgagggtctgggctggggtctg
ggcgcgttctataccaagcagaccgggacgactgtcgtaaaccaggacgcttcgcagttc
tggtatgcggtcaacccgaatgcgctggtcaacctgccattcgcagcgatcggcctgccg
aatgttccaggctttacgccgttcccgctgccaaacacgcttggcatcgcaacccgcgta
aacgtacctgtgtacagccagacgtggtctttcaatgccaacctgcgctatcgctcagga
ccgctctcgattgagggcggcgtgcgttactccatcctcaaaaacgtacagacgacgcag
cttaccctgactggcgccgttcaggatggtccgcgcgagattgtccccgtcaacctgcag
cgcaacaccaacaagccgatcaccggtggcgtaaacatttcctacgcgatcatgcctgac
ctcaatgtgtttgctgcctacggccattctttccgggcgggcagcacgggcgttgctctg
ccgaatggcctctcgaatgacctcatccgcaccaacccggaaaagagcgattcattcgaa
gcgggcatcaagggcaccatattcgatcgccgggtaaactatgcgatttcgggctactac
cagaagatcgacaacttcctgtcacgcttctccgggatctattataacgcgcctgccaac
cagccgcagaccggatttttcgacttcaactataacgctgatgccacgatcaagggcgtt
gaggcctcgttcgacggccgcgtatccgacaattgggatcttggcgtttcggccgcctac
accaaggcgcgcttcgacaacgcccgtgtgccttgcaccgactttgccgggaccggggtg
cccaatcaaaacggcacacccaaggtcacgggcaatggcaatgtcagctattgcatcgcc
aaggggcgtcttgccgaggttcccgacttcagcctgactgccaacaccgaattgcggctg
ccaatggacagcttcacaccgttcgtgcgcgcgctgtttacttaccggccgggctttgac
tcggagcgagcccagtttacgtaccagtcacgagaactactgaacatgttcgtcggcgtg
cgcacaaacgatggcaagtgggaactcgacgtatttgcccgcaatttgctcgatcaacgt
cgcatcaccgtgcgcggccttggtctcggaacagtcgactcacttatcgccggcacgttc
aattccggctaccgtcaggtcaacatgaccaatccgcgtgaattcggcgctacgctgaag
ttcaactggtaa
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