Novosphingobium sp. THN1: C7W88_21365
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Entry
C7W88_21365 CDS
T05635
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00521
Streptomycin biosynthesis
not00541
Biosynthesis of various nucleotide sugars
not01100
Metabolic pathways
not01110
Biosynthesis of secondary metabolites
not01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C7W88_21365 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C7W88_21365 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C7W88_21365 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C7W88_21365 (rfbB)
00525 Acarbose and validamycin biosynthesis
C7W88_21365 (rfbB)
Enzymes [BR:
not01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C7W88_21365 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AXU21413
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Position
pTHN:958816..959889
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AA seq
357 aa
AA seq
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MANLLVTGGAGFIGGNFVRYWSKEHPDDTIIVLDCLTYAGNRSTIADVEQAEFVVGDIRD
TALVEKLLREHGVATLVHFAAESHVDRSITGPDAFIETNVIGTSSLLKAARKVWLDEGSG
KDHRFHHISTDEVYGSLGPDDPAFSETTPYQPNSPYSASKAASDHLVRAWHHTYGLNTTT
TNCSNNYGPYHYPEKLIPLFILNALSGKPLPIYGDGLNVRDWLYAEDHCRGIDAALEHGK
PGETYNIGGGEELPNMAVIDRICAEVDRAFAEIDGLADRYPQAPAARGRATCELKTFVAD
RKGHDRRYAIDETRARTELGYVPQHDFATGLRSTLRWYLENEAWWRPLCVTGRSALS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttggctaacctgcttgttaccggcggtgccggcttcattggcggcaacttcgtgcgctac
tggagcaaggagcatcccgacgatacgatcatcgtgctcgattgcctgacttatgccggc
aaccgttcgaccattgccgatgtcgagcaggctgaattcgtcgtcggcgacattcgcgac
acagcgcttgtcgagaagctgttgcgcgaacacggcgtggcaacgctcgtccattttgcc
gctgaaagccatgtcgaccgctcgatcacggggcccgacgccttcatcgagacgaatgtg
atcggcacgagcagcctgctcaaggccgcgcgcaaggtctggcttgacgaaggctcgggc
aaggatcaccgctttcaccatatctcgaccgacgaagtctatggctcgcttggccccgat
gatccggcgttcagcgaaaccacgccataccagcccaattccccctactcagcatccaag
gctgcttccgatcacctggtgcgtgcctggcatcatacctatgggctgaatacgacgacg
accaattgctccaacaactacgggccgtaccattaccctgaaaaactcatcccgctgttc
atcctcaacgcgctatcgggcaagccgctgccgatctacggcgacggcctgaatgtgcgg
gactggctctacgccgaagaccattgccgtggcatcgacgcggcgcttgagcatggcaag
cctggtgaaacctacaatatcggtggcggcgaggaactgcccaacatggccgtgatcgac
cgcatctgcgctgaagtcgaccgcgcctttgccgagatcgacggccttgccgaccgctac
ccgcaggcccctgcagcacggggtcgcgccacctgcgaactcaagacattcgttgcagat
cgcaagggccatgaccgccgctacgcgatcgacgagacccgggcccgcaccgaactcggc
tatgtcccgcagcacgactttgcaaccgggttgcgcagcaccttgcgctggtacctcgaa
aatgaagcctggtggcggccgctgtgcgttaccggacgaagtgcactttcgtga
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