Novosphingobium sp. THN1: C7W88_21390
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Entry
C7W88_21390 CDS
T05635
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
not03036
]
C7W88_21390
Chromosome and associated proteins [BR:
not03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
C7W88_21390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
RsmJ
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
AXU21417
LinkDB
All DBs
Position
pTHN:964756..969021
Genome browser
AA seq
1421 aa
AA seq
DB search
MTATHARASAIMGAARTLADRLLLAASISRATLTEAMTKSAGGSDFQGAWQQRDSFEALE
VALSLAIPELVGPMEVAAAISALEAIAQALPTQTVRSEDQIQFQQFSTPPALACLAVHLA
RLSSDDMVLEPSAGTGIIAALAKRVAGNLVLNELEATRADLLEAVFPGTKVYRHDGANLN
ARLSGTERPSVVLMNPPFSVSQSRGKDKSTAARHLRAALDHLLPGGRIVAIMPDWFSPTA
RNEKTFRRSLEGARVVLSLRLDKGGYAKHGTGIAVRVLVIDKVPGEISVSTINRGLVSEL
FAALPTVPLRATLRHPTQAAAPRPRLSLFRSVKTGPARPVIVRAPQTNQVRPVDYEVLAE
PAAMGEQRGVYADYRPSRLVIADAGEHPTHLVESAAMASIAAPKPRYVPSLPERTVTARL
LSAAQLETVIYAGEAWSRDLHGRFRHPAGEVALKEDPQGALYRTGFFLGDGTGAGKGRQA
AACILDQWLKGNRRHIWISKNAPLLEDAQRDWTAIGGLPSDILDLARWKIGEEITAPEGI
LFVPYGTLRSSRVEDTRLDQVVRWAGEDFEGVIVFDEAHEMGGVAGGEGALGQKQGSLQG
IAGVVLQNTLPRARVLYASATGASDVNNLAYAVRLGLWGPGTAFATREQFISEIRDGGIA
AMELVARDLKASGLYLARALSFAGVEYEILRHDLTPEQIAIYDTYCEAWTIIHQNLEAAL
ELTGIVDGLENRTLNSGAKAAARGRFEGTKQRFFAQVLLSLKLPSIYPAIDEHLANDESV
VVQLVSTAESILNRRLKELDPDEREALELDLSPREAIVDYLTRAFPTRQMEEYTDELGDV
RSRPMWDQAGNPVHNPQAEAARAALIEHICAMPPIPTALDALLEHYDVTAVAEVTGRSKR
LVRDGSGQQRLESRSPRTNLAETTAFMTGAKRILVFSDAGGTGRSYHASLDARNQQRRVH
FLLEPGWRADRAIQGLGRTHRTHQACPPLFRPVTTDCKGEARFTSTIARRLDALGALTRG
QRQTGGQGMFDASDNLESIYAKHALHDWYGLLATAKLKSTTLYEFQRVSGLELTDQDGVL
REDLPPIQRWLNRILAMKIAVQNAIFDEFLTLVETRVSAAKEAGTFDIGVEMVAVEACEV
LSDTVIRTDPVTGATSHLLELSLTQRRKVLSLERVLKMVSYEEQPLFLRNDKSGKVALAV
PAPSHMDEEGHTIRRYELVRPLRSEYLRADRLHESAWEPVSKARFSALWEEEYAADESQL
VTETVYLATGLLLPIWGALPKEDLTVNRIVDKSGASWLGRHVHDLYVDATLEKLGVARKA
QTDPAKIAAAILGGGTWKAPHPFNFTIRTARVNGSRRIEIVDAEAARIPELKAKGCFTEI
IAYKTRVFVPTDKADQILASLIEQAPCEQLADANGCGRLSS
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacgcatgctcgcgccagtgccattatgggcgctgcgcgcacccttgccgac
agactgcttcttgcagcatcgatcagcagggccacgctcaccgaggccatgaccaaaagc
gcaggaggcagcgatttccagggcgcgtggcagcagcgcgacagtttcgaggccctggaa
gtcgctctttccctggcaattcccgagcttgtgggcccgatggaagtggcagctgcaatc
agcgcgctcgaggcgattgcccaagccttgccaacgcaaacggtgcgcagcgaggaccag
atccagttccagcagttctcgacgccgccggcgctggcctgtcttgccgttcatctggcg
cggctctccagcgatgacatggtgctcgaaccgagcgcaggcaccgggatcatcgcggca
cttgccaagcgcgtagccgggaacctggtcctcaacgaactcgaagccacccgcgccgac
ctgctcgaggccgtgtttccgggcacgaaggtctaccgccacgacggtgcgaacctcaac
gcgcggctttccggaacagaacggccgagcgttgttctgatgaacccgcccttctcggtg
tcgcaatcgcgcgggaaagacaagagtacggccgcgaggcacctgcgcgccgcacttgat
catctgctgcccggtggccggatcgtcgcgatcatgccggactggttttcgcccacagcg
aggaacgagaaaacctttcggcgctccctcgaaggcgcacgggttgtcctgtcgctccgt
ctggacaagggcggctatgccaagcacggcaccgggatcgccgttcgcgtgctggtgata
gacaaggtgccgggcgagatcagcgtgtccacgatcaatcgcggcctggttagcgaactc
ttcgccgcgttgccaaccgtgccactgcgcgcgacgctgcgccacccgacgcaggcggca
gccccccgaccaaggctcagcctgttccgctcggtgaagacaggtccagcccggcccgtg
atcgtgcgagctccccagaccaatcaggtccgccccgtcgactatgaagtgctggccgaa
cctgcggccatgggcgagcagcgcggggtctatgccgattatcggccctcgcgcctggtg
atcgcggacgctggcgaacatccgacccacctcgtcgaatctgccgccatggcctcgatc
gccgcgccgaaaccccgctacgtgccctcgctacccgaacgcaccgtgacggcacggctt
ctttctgccgcccagttagaaaccgtgatctacgcaggcgaggcatggagccgcgatctc
catggccgcttccgccatcccgccggcgaagttgcgctcaaggaggatcctcaaggtgcg
ctctaccgcaccgggttcttcctcggcgatggcaccggggcagggaaggggaggcaggcg
gcggcctgcattcttgatcagtggctcaagggcaatcgccgacacatctggatttcgaag
aatgcaccgctgctcgaagacgcgcagcgcgactggaccgcgatcggcggattgccatcc
gacattctcgaccttgcccgctggaagatcggcgaggagattaccgcgcccgaaggaatc
ctgttcgtaccctatggcacgctgcgcagctcgcgcgtcgaagatacccggctcgaccag
gtcgtccgctgggccggtgaagacttcgaaggcgtgatcgtcttcgacgaagctcacgaa
atgggtggcgttgcaggcggggaaggggcactaggccagaagcagggctcgcttcagggc
atcgccggcgtggtgctccagaacacgctgccgcgcgcccgcgtgctctatgcctcggca
accggtgcttcggacgtcaacaacctcgcctatgcggtccggcttggcctgtgggggccg
ggcacggcctttgcaacccgcgagcagttcatcagcgaaatccgcgacggcgggattgct
gcaatggaactggtggcgcgcgacctcaaggcctccgggctctacctcgcccgggcattg
agcttcgcgggggtagagtacgaaatcctgcgccatgacctgacccctgagcagatcgct
atctacgacacctattgcgaggcctggacgatcatccatcaaaacctcgaagcggcgctc
gaacttacgggcatcgtcgatgggctcgagaacaggactctcaacagcggcgccaaggcg
gcggcccgcggccggttcgaggggaccaagcagcgcttctttgcgcaagtcctgctctcg
ctgaagctgccctcgatctatcccgcgatcgacgagcatctggcgaacgacgaaagcgtc
gtcgttcagctggtcagtaccgcggaatcgatcctcaaccggcggctcaaggagctcgat
cctgacgagcgcgaagcgctggaactggacctttcgcccagggaagcaatcgtggactac
ctcacccgggccttcccgacccggcagatggaggaatataccgacgagctcggtgatgtg
cgctcgcggccaatgtgggaccaggcaggcaatccggtccataatccgcaggccgaggcc
gcgcgggccgccctgatcgagcatatttgcgccatgccgccgatcccgacggcgctcgat
gccttgctcgagcactacgacgtgactgcggtggccgaagtgacagggcgcagcaagcgc
ctcgttcgtgatggttcgggccagcagcgcctcgaaagccgctcaccccggaccaacctt
gctgaaaccactgcgttcatgaccggcgccaagcgcatcctcgtgttctcggatgcgggg
ggcacggggcgcagctatcacgccagccttgatgccaggaaccagcagcgccgggtccat
ttcctgctcgagcccggatggcgcgcagaccgggcaattcagggcctggggcgcacccac
cgcacgcaccaggcctgcccgccgctgttccgccccgtcaccaccgactgcaagggcgaa
gcccggttcaccagcacgatcgcgcgccgcctcgatgccttgggcgcgttgacccgcggc
cagcgccagaccggtgggcaggggatgttcgatgcttccgacaacctcgagagcatctat
gcgaagcacgcgctgcacgactggtacggcctactggcgacggccaagctcaagagcacg
accttgtacgagttccagcgggtgagcgggctcgagctcaccgaccaggacggcgtgctg
cgcgaggacctgcctccgattcagcgctggctcaaccgcatcctcgccatgaagattgcc
gtccagaacgccatcttcgacgagtttctgacccttgttgaaacccgcgtctccgctgca
aaggaagccgggactttcgacatcggggttgagatggtggcggtcgaggcctgcgaggtg
ctgtccgacacggtgatccggaccgaccccgtgaccggcgcgacctcgcacctgcttgag
ctgtcgctgacccagcggcgcaaggtcctctcgctcgagcgcgtgctgaaaatggtatcc
tatgaggagcagccgctgttcctgcgcaatgacaagtcgggcaaggtcgcgctcgcggtt
ccggcaccctcgcacatggacgaggagggccacacgatccgccgctacgaactcgtgcgg
ccgctgcgcagcgagtacctccgcgctgaccggctccacgagtccgcctgggagcccgtc
agcaaggccaggttcagcgcgctgtgggaggaagaatacgcagccgacgaaagccagctt
gtcaccgagaccgtctatctcgcaacggggctgctgctgccgatctggggcgcgcttccc
aaggaagacctcacggtcaaccgcatcgtcgacaagtccggcgcctcctggctcggccgc
catgtccacgacctctacgtcgatgcgacccttgagaagctcggtgttgcccgcaaggcg
cagaccgatccggccaagattgccgccgccattctcggcgggggcacgtggaaggcgccg
catccgttcaatttcacgatccgcacagcgcgagtgaacggttcccgcaggatcgagatt
gtcgatgccgaagccgcgcgcatccccgagctcaaggccaagggctgcttcacggaaatc
attgcctacaagacgcgggtgttcgtgccgacggacaaggccgaccaaatccttgcaagc
ctgattgaacaggcaccttgcgagcagcttgcagacgcgaacggatgtggtagacttagt
tcatag
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