Novosphingobium sp. THN1: C7W88_22060
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Entry
C7W88_22060 CDS
T05635
Name
(GenBank) hypothetical protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
not
Novosphingobium sp. THN1
Brite
KEGG Orthology (KO) [BR:
not00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
not03000
]
C7W88_22060
Transcription factors [BR:
not03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C7W88_22060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AXU21511
LinkDB
All DBs
Position
pTHN:complement(1102599..1103489)
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AA seq
296 aa
AA seq
DB search
MTSLRLFLQVARTCSFSETARAANLSQPALSRTIKLLEEDLGVRLFDRNSRNVMLTTAGA
ALVPIVERLTADFDLAFRELDQTFSGERGRVVVGALPSIAADFLPRAIACFLAERRQVEV
IVRENLSGGLLQNLQDRSIDLSITIPPGGTAPIRFEPMFEDEYLLVCRPEDLELIPDPAP
WRVFEQFPFIAMEPRSSVRMMTESVFAAAGIRTDARFECVQLATVGGLIGEGLGISLLPR
STLPLMAIGKQIAWRKTEAPVASRTIGMCTLADRTLAPAAEAFRQLVLAMAVDTKF
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtctgaggctgtttctgcaggtggcaaggacttgcagcttcagcgaaacggcg
cgcgccgccaatttgtcgcaaccagcgctcagccgcactatcaagcttcttgaggaagat
ctcggcgttcgactgttcgaccgcaattcacgcaacgtcatgctgaccacggccggtgcg
gcgctggtgccgattgtcgagcgactgaccgccgactttgacctcgccttccgcgagctc
gaccagacgttcagtggcgagcgcggccgggtggtggtgggggcgctgccatccatcgct
gccgatttcctgccgcgggcgattgcctgcttccttgccgagcgcaggcaagtggaagtc
atcgtgcgtgaaaacctcagcgggggattgctgcagaacctgcaggaccgttcgatcgac
ctttcgattaccattccgccgggcggcactgcgccgatccggttcgagccgatgttcgaa
gacgaatacctgctggtctgccgcccggaagatctcgaactgatacccgatcccgctccc
tggcgggtgttcgagcagtttcctttcatcgcgatggaaccgcgcagcagtgtgcggatg
atgaccgaaagcgttttcgccgccgccggcattcgtaccgacgcacgcttcgaatgcgtg
caactggcgacggtaggcggtctgattggcgaaggactcggcatttcgctcctgccccgc
tccactttgccgctgatggcgatcggcaagcagattgcgtggcgaaagaccgaagcgcct
gtggcgtcgcgcacgatcggcatgtgcacgctggcagaccggactcttgccccggcagcg
gaggcatttcggcagctcgtcctggccatggcggtcgatacaaaattctga
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