Natronococcus occultus: Natoc_0141
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Entry
Natoc_0141 CDS
T02426
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nou
Natronococcus occultus
Pathway
nou03022
Basal transcription factors
nou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natoc_0141
09124 Replication and repair
03420 Nucleotide excision repair
Natoc_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nou03021
]
Natoc_0141
03036 Chromosome and associated proteins [BR:
nou03036
]
Natoc_0141
03400 DNA repair and recombination proteins [BR:
nou03400
]
Natoc_0141
Enzymes [BR:
nou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Natoc_0141
Transcription machinery [BR:
nou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Natoc_0141
Chromosome and associated proteins [BR:
nou03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Natoc_0141
DNA repair and recombination proteins [BR:
nou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Natoc_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_34
HBB
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGB36021
UniProt:
L0JTF0
LinkDB
All DBs
Position
136042..138219
Genome browser
AA seq
725 aa
AA seq
DB search
MSETAGYMRFFPYEQPYENQREAMDRIYNALVRDQDVLFEGACGTGKTLSSLVPALEVAR
EQDKTVVITTNVHQQMRQFVAEARAITREESLRAVVFKGKGSMCHIDVGYEECQTLRDNT
RAVVDAERDREQLERRQRELLAESQEGSDGGSAADARSAVMDELESIEDRLEDLEEKNVC
DYYRNNLTQDTDDFFAWLFDDVRTPDEIYEYAEQREFCGYELLKEGIEGVDLVVCNYHHL
LDSTIREQFFRWLGRDPEDVIAVFDEAHNVEDAAREHATRTCSERTFDSALDELADSDDP
RAEDATNVLSAFHRALVETYEDSFGFGERERIGEGWEDVPIANEDRRDELTLEFLQRYSG
QGIDDDLEAAMALGQELDEEYEEAYREGETATRTECQTLQAAGFVSAWMDEGTKEGLYPV
VSVTRDAGTDEIYGRAELYTCLPRQVTGRLFEEVSATILMSATLQPFDVTEDVLGLEDPI
TMAYGLEFPEEHRRTYAVETPPLFSSDRDDPDVQETVADALDDAIRMTAGNTLAFFPNYG
EASRYAERLERRGSATVYLDEPGVAVEELRQEFVADDDGVLCTSLWGTLAEGVSFDGDDA
RTVLVVGVPYPHLDDRTEAVQEAYDAAFEGTDTGWRYAVEIPTVRKTRQALGRVLRSPED
IAVRALLDRRYSKDAKSDLGKYSVNGTFPHEEREELLDIEPSKLKFAMRNFYGDHGAYEG
DPPAP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagacagccgggtacatgcgattcttcccgtacgagcaaccctacgagaaccag
cgtgaggcgatggaccgcatctacaacgcgctggttcgggaccaggacgtgctgttcgaa
ggggcctgcgggaccggcaagacgctctcgtcgctggttccagccctggaggtcgcccgc
gagcaggacaagacggtcgtcatcacgaccaacgtccaccagcagatgcgccagttcgtc
gccgaagcccgggcgatcacccgcgaggagtcgctccgtgcggtcgttttcaaggggaag
gggtcgatgtgtcacatcgacgtcggctacgaggagtgccagaccctgcgggacaacacc
cgggccgtggtcgacgccgagcgcgaccgcgaacagttagagcggcgccagcgggagctg
ctcgccgagagccaggaaggcagtgacggtggctcggccgcggacgcccgcagcgccgtc
atggacgagctcgagtcgatcgaggaccgtctcgaggacctcgaggagaagaacgtctgt
gactactaccggaacaacctcacgcaggataccgacgacttcttcgcctggctgttcgac
gacgtccgcacgcccgacgagatctacgagtacgccgaacagcgggagttctgtggctac
gaactcctgaaggaggggatcgagggggtcgatctggtcgtctgtaactaccaccacctg
ctggattcgacgatccgcgagcagttcttccggtggctcggccgcgatcccgaggacgtg
atcgccgtcttcgacgaggctcacaacgtcgaggacgccgcccgcgagcacgcgacccga
acctgctcggagcggaccttcgattcggcgctcgacgagctcgccgacagcgacgatccc
cgggccgaggacgcgaccaacgtcctctcggcgtttcaccgcgcgctggtcgagacctac
gaggactccttcgggttcggcgagcgcgaacggatcggtgaaggctgggaggacgtcccg
atcgcgaacgaggatcgacgcgacgagctcaccctcgagttcctgcagcgctattcgggg
caggggatcgacgacgacctcgaggccgcgatggcgctgggccaggagctcgacgaggag
tacgaggaggcctaccgggagggcgagacggctacccggacggagtgtcagacgttgcag
gcggcgggcttcgtcagcgcgtggatggacgagggaaccaaggagggactgtacccggtg
gtctcggtgacgcgggacgccggcaccgacgagatctacgggcgcgcggagctgtacacc
tgtctcccccgtcaggtcaccggacggctgttcgaggaggtctcggcgacgatcctgatg
agcgcgacgctccagcccttcgacgtcaccgaggacgtcctggggctcgaggacccgatc
acgatggcctacgggctcgagttccccgaggaacaccgccggacctacgccgtcgagacg
ccgccgctgttctcctcggaccgggacgaccccgacgtccaggagaccgtcgccgacgcg
ctcgacgacgcgatccggatgaccgccggtaacacgcttgccttcttcccgaactacggc
gaggcgagccgctacgcggagcgactcgagcgccgcgggtcggcgacggtctatctcgac
gagccgggcgtcgccgtcgaggagctccgccaggagttcgttgcggacgacgacggcgtc
ctctgtacctcgctgtggggcaccctcgcggagggagtgagcttcgacggcgacgacgct
cggacggtgctcgtcgtcggcgttccctacccccatctcgacgaccggaccgaggcagtc
caggaagcctacgacgccgccttcgaggggaccgacaccggctggcgctacgccgtcgag
attccgacggtccgcaagacccgccaggcgctcggtcgcgtgcttcgctcgccggaggat
atcgcggtgcgtgcgctgctggatcggcgctactcgaaggacgcgaagtccgacctgggc
aagtacagcgtcaacggaacgttcccccacgaggagcgcgaggagctactcgatatcgag
ccctcgaagctcaagttcgcgatgcggaacttctacggcgatcacggcgcctacgagggg
gatccgccggcgccctga
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