Natronococcus occultus: Natoc_0501
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Entry
Natoc_0501 CDS
T02426
Name
(GenBank) putative DNA binding protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nou03000
]
Natoc_0501
Transcription factors [BR:
nou03000
]
Prokaryotic type
Helix-turn-helix
Other families
Natoc_0501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
Response_reg
GAF
GAF_3
Sigma70_r4_2
HTH_24
Sigma70_r4
HTH_20
GerE
Motif
Other DBs
NCBI-ProteinID:
AGB36363
UniProt:
L0JWZ1
LinkDB
All DBs
Position
481305..482990
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AA seq
561 aa
AA seq
DB search
MSDSVSRAGDDTDVGGTLELLLIEDNPGDARLIQEMLRDATELTQRVNPDESTNQAPTVI
HEDRLEDGIETLESSPPDLVLLDLNLPDSRGLDTLESVSTIANETPIVVFTGVSDQEVGV
QAIQSGAQDFLVKDEVTDELLIRTIHHAIERAHQERQRRRQREQLESLNRLNRIGHDITH
AVITTETRAELEQEVCDRLVEDDGYRFAWLGSVNPGSDRIEPTAAAGAEDGYLDEIEVTA
DPEDERGQGPSGTAIRTGEVQVADDTQTDETFGPWKEAASDRGYRSSIAIPIVHEDLVYG
VLNVYSESVRSFTDAEATILSRIGDVIAHAITAIERKDALVSDAVIELEFRIEEMAPELI
ALSTEESCTIRFDQMIHGDETLLVYGSATDLDQETFLETIEETDGLGDARVLSARKDYFE
FELVAPTAVSLFETIATHGGRVESATIEDGEFRFVVELPRGRDTRQMIELLKEHRSDVTY
LAQRTTERSERSESGSESVLESDLTEKQRAALETAYFAGYFDWPRESTGEEIADRLGISP
ATFNQHLRTSERKFFDSVLGE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctgtttccagggcgggcgacgacaccgacgtcggcgggacgctcgagctt
ctgttgatcgaggacaaccccggtgacgcccggctgatccaggagatgctccgggacgcg
accgagctcactcagcgggtcaacccagacgagtcgacgaatcaggcaccgacggtgatt
cacgaggaccgcctcgaggacggcatcgagaccctggagtcctcgccaccggacctcgtc
ttgctcgatctcaacctccccgacagccgcgggctcgataccctcgagtcggtctcgacg
atcgccaacgagacgccgatcgtcgtcttcaccggggtcagcgatcaggaggtcggcgtt
caggcgattcaaagcggcgcccaggacttcctcgtcaaagacgaggtcaccgacgagttg
ctgattcgaacgatccatcacgcgatcgagcgggcccaccaggaacgacagcgccgccgc
cagcgcgagcagctcgagtcgctcaaccggctcaaccggatcggtcacgacatcacccac
gcggtgatcacgaccgagacccgcgcggagctcgaacaggaggtctgtgaccgactcgtc
gaggacgacggctaccgattcgcctggctgggcagcgtcaaccccggcagcgatcggatc
gagccgacggctgcggccggcgccgaagacggctacctcgacgagatcgaggtcacggcc
gatccggaggacgaacgggggcagggaccgtccggaacggcgatccggaccggggaggta
caggtggccgacgacacgcagaccgacgagacgtttggcccctggaaagaagctgcgagc
gatcgggggtaccggtcgtcgatcgcgatcccgatcgtccacgaagacctcgtttacggc
gtgttgaacgtctactcggagtcggtccgttcgttcacggacgccgaggcgacgatcctc
tcgcggatcggcgacgtcatcgcccacgcgatcaccgcgatcgaacgcaaggacgcgctg
gtcagcgacgccgtcatcgaactcgagttccgcatcgaggagatggcccccgaactcatc
gccctctccacggaggaatcgtgtacgatccggttcgaccagatgatccacggcgacgag
acgctgctggtctatggctccgcgacggatctcgatcaggagacgttcctcgagacgatc
gaggagaccgacgggctcggcgacgcacgagttctctcggcccgaaaggactacttcgag
ttcgaactcgtcgcgccgaccgcggtctcgctgttcgaaacgatcgcgacccacggcggc
cgcgtcgagtcggcgacgatcgaagacggcgagttccggttcgtcgtcgaactcccccgc
ggccgagacactcgccagatgatcgaactgctcaaggagcaccgttcggacgtcacctac
ctcgcacagcggaccaccgaacggagcgaacgctcggagtcgggctcggagtccgtcctc
gagagcgatctcacggaaaaacagcgggccgccctcgagacggcctacttcgcgggctac
ttcgactggccccgcgagagcacgggcgaggagatcgccgaccgcctcggaatctcgccg
gcgaccttcaaccagcacctgcggacctccgagcggaagttcttcgattctgtgcttggc
gagtaa
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