Natronococcus occultus: Natoc_0516
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Entry
Natoc_0516 CDS
T02426
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nou03016
]
Natoc_0516
Enzymes [BR:
nou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Natoc_0516
Transfer RNA biogenesis [BR:
nou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Natoc_0516
Prokaryotic type
Natoc_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGB36378
UniProt:
L0JX02
LinkDB
All DBs
Position
complement(494191..495603)
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AA seq
470 aa
AA seq
DB search
MRPAHPTEQAVGIDHYVSDADGVGGRLRTEDAHFRVRELERFGTEPLESSTDAYPHLVFR
ATLRGWDTNDFASRLSDALGISRERVNWAGTKDKYAVTTQLFSVYGAEPEELPDVDGADL
EVLGRAGRNLEFGDLAGNAFEIVVADPDRPGNAEPITDALREFGGLDRRRGGEEGDGKET
PIGVPNFFGQQRFGSRRPVTHKVGLEIVRGNWEGAVMAYLGNPTDAEPEGTQEARAFVDR
ELRRSSDSSSGERRDPGDWQEALERIPNRLRYERSMCHALAELDEEPGPEEFRAALERVP
SNLQRLFVHAAQSYAFNRMLSERLERGLPFDRPVAGDVVCFADSDAPEGLVLPDTDRLQR
VDERRVDSVTRHCERGRAFVTAPLVGTETELADGEQGEIERDVLADLELAPEDFDLPGEF
HSTGTRRAVLVRTALELDREPLTISFALPKGSYATVVAREYLKVDPIDLG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccagcccatcctacagagcaggccgtcgggatcgaccactacgtcagcgacgcc
gacggcgtcggcggccgcctccgcaccgaggacgcccactttcgcgtgcgcgagctcgag
cgcttcgggaccgagcccctcgagtcctcgaccgacgcctacccccacctcgtgttccgg
gcgacgcttcgggggtgggacaccaacgacttcgcttccaggctctccgacgccctggga
atctcccgggagcgagtgaactgggccggcacgaaggacaagtacgccgtgaccacgcag
ctgttctcggtctacggcgccgagcccgaggagttgcccgacgtcgacggcgccgatctc
gaggtgcttggtcgggcgggacggaacctcgagttcggggatctggcgggcaacgccttc
gagatcgtcgtcgccgaccccgatcggcccgggaacgccgagccgatcaccgacgcgctc
cgcgagttcggcgggctcgatcgccgacggggcggagaggagggcgacggaaaggaaacg
ccgatcggcgtccccaacttcttcggccaacagcgcttcggcagccgtcgcccggtcacc
cacaaagtgggcctcgagatcgtccgcgggaactgggagggagccgtgatggcgtacctg
gggaacccgaccgacgcggagcccgaggggacacaggaggctcgtgccttcgtcgaccgc
gaactccgacggagttcggattcttcgagcggggagcgacgcgacccgggagactggcag
gaggccctcgagcggattcccaaccgcctgcgctacgagcgctcgatgtgtcacgcgctg
gccgaactcgatgaggagcccggtcccgaggagttccgcgcggccctcgagcgggtcccc
tcgaacctccagcggctgttcgtccacgccgcccagtcgtacgccttcaaccggatgctg
agcgagcgcctcgagcgcgggctcccgttcgaccgccccgtcgccggcgatgtcgtctgt
ttcgcggattcggacgcccccgaagggctcgtcctgcccgacaccgatcgcctccagcgg
gtcgacgagcgccgggtcgactccgtcacacgccactgcgagcgcggccgcgccttcgtc
accgcgccgcttgtcggcaccgagaccgagctggccgacggcgagcaaggcgagatcgaa
cgcgacgtcctcgcggacctcgagctcgcacccgaggacttcgatctccccggcgagttc
cactcgacgggcacgcgtcgggccgtcctcgtccggacggcgcttgaactcgaccgcgag
ccgctgacgatctccttcgctctgccgaaggggtcgtacgcgaccgtcgtcgcgcgggag
tacctgaaggtcgatccgatcgacctcggctga
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